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492
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Typo in citation for RNASeqPower
RNASeqPower
citation
21 months ago
stephenjjohnson
• 0
3
votes
2
replies
533
views
Submitting a new package prior to publication
package-creation
citation
submit-package
updated 4.2 years ago by
shepherl
3.8k • written 4.2 years ago by
Krutik Patel
▴ 10
2
votes
2
replies
800
views
change the citation of accepted Bioconductor R pacakage
citation
updated 5.6 years ago by
shepherl
3.8k • written 5.6 years ago by
xyluo1991
• 0
0
votes
1
reply
606
views
Request Citation Permission
citation
updated 5.9 years ago by
Martin Morgan
25k • written 5.9 years ago by
takakoma
• 0
12
votes
5
replies
1.8k
views
News:
DOI for packages
DOI
doi
packages
citation
publication
News
6.4 years ago
shepherl
3.8k
14
votes
8
replies
2.6k
views
News:
Bioconductor packages now each have a DOI.
doi
citation
News
updated 6.6 years ago by
Martin Morgan
25k • written 6.6 years ago by
Sean Davis
21k
0
votes
2
replies
970
views
differences in formatting of the citation on the bioconductor link and from within R console
citation
7.5 years ago
bhakti.dwivedi
• 0
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Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Answer: Microarray Limma Model fitting and DEG
by
Gordon Smyth
50k
This dataset seems straightforward to analyse using the original MAS expression values on GEO. MAS expression values are known to be noisy …
Answer: Trimming a section of a scaffold from a genome
by
James W. MacDonald
65k
It's undoubtedly possible, but you don't provide enough information to go on. If I assume you are talking about an existing `BSgenome` pack…
Comment: DEG Filtering
by
Gordon Smyth
50k
I already know that you using CEL files because you need them to perform RMA normalization. Yes, you should follow the advice I have alread…
Votes
DESeq2 normalization vs VST vs rlog
Answer: DESeq2 "Contrast" option
Answer: error in ChAMP loading file
Circumvent creating .ff files in the working directory when using genotype.Illumina() function
Answer: Problem with maplot {affy} method when using rma {affy} method output as its inp
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