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clariom
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602
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Aligning Clariom D against reference Genome and transcriptome pipeline
Clariom
Align
MicroarrayData
Alignment
Microarray
14 months ago
jsharif
• 0
1
vote
5
replies
1.2k
views
Correct annotation R package for human clariom array analysis
clariom
oligo
affycoretools
pd.hugene.2.0.st
updated 5.1 years ago by
James W. MacDonald
65k • written 5.1 years ago by
svlachavas
▴ 830
1
vote
3
replies
845
views
Selecting probe data from Clariom D assays using the fid probe tags
clariom
pd.clariom.d.human
updated 5.5 years ago by
James W. MacDonald
65k • written 5.5 years ago by
AliStair Rust
• 0
1
vote
1
reply
970
views
RNA degradation plot for Clariom S and Clariom D
Rna degradation
Clariom
updated 6.1 years ago by
James W. MacDonald
65k • written 6.1 years ago by
kritikamish99
▴ 10
2
votes
4
replies
2.2k
views
affycoretools annotateEset problem using Clariom D arrays
affycoretools
clariom
updated 6.6 years ago by
James W. MacDonald
65k • written 6.6 years ago by
willj
▴ 30
2
votes
2
replies
1.0k
views
paCalls with Clariom Chips
oligo
microarray
clariom
updated 6.8 years ago by
James W. MacDonald
65k • written 6.8 years ago by
kmvaldez2
• 0
0
votes
0
replies
776
views
genefu and clariom d
clariom
genefu
6.8 years ago
info
• 0
7 results • Page
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Recent ...
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Comment: Methylation Analysis experiment design using Limma
by
hortense96
• 0
Thank you very much for your reply and your suggestion, as I'm having a bit of trouble finding information on how to manage this part of th…
Comment: Limma design with continuous and categorical covariates
by
hortense96
• 0
Hello, I'm trying to do a differential methylation analysis with the Limma package and was wondering if you had any suggestions on how to …
Answer: minfi::read.metharray.exp
by
Basti
▴ 770
Could you show `list.files("~/Users/clarachretienneau/Desktop/clock epigenetic/PJ1209132_ScanData")` ? There may be a problem related to th…
Comment: DESeq2 - dispersion estimation when there is none
by
WardDeb
• 0
Thank you for the pointers, I'll revert back again to the method section of the paper. As for the negative relationship of the estimated di…
Comment: Error for AnnotationForge makeOrgPackageFromNCBI function
by
Gayatri
• 0
Hello James, How to generate the db? By running the makeOrgPackageFromNCBI() command? I have tried doing that, first by just deleting the …
Votes
Answer: OrgDb for maize
Answer: DESeq2 - dispersion estimation when there is none
Comment: Cannabis and KEGGgraph
Comment: Cannabis and KEGGgraph
Answer: Cannabis and KEGGgraph
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