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cluster
•
reset
1
vote
7
replies
1.4k
views
Adding geneID to list of gene locus IDs
cluster
OrgDb
clusterProfiler
written 16 months ago by
Chruut
• 0
2
votes
4
replies
4.3k
views
Error and questions about clustering & ploting functions in r packages cluster and mclust regarding kmeans method
cluster
mclust
limma
clusplot
kmeans
8.7 years ago
svlachavas
▴ 830
1
vote
2
replies
1.4k
views
Counting the no. of mutational clusters of each class, or kataegis
cluster
8.2 years ago
niavarani
▴ 10
0
votes
6
replies
1.1k
views
Error when trying to access BiomaRt from a cluster
biomaRt
R
cluster
updated 3.7 years ago by
Martin Morgan
25k • written 3.7 years ago by
camerond
• 0
0
votes
2
replies
1.9k
views
cluster composition in Mfuzz package
cluster
mfuzz
gene names
updated 8.0 years ago by
Assa Yeroslaviz
★ 1.5k • written 8.0 years ago by
thomas.dobrenel
• 0
1
vote
2
replies
1.8k
views
ident function in sce
SingleCellExperiment
cluster
identities
sce
updated 3.9 years ago by
Aaron Lun
★ 28k • written 3.9 years ago by
reinepapillon
• 0
0
votes
5
replies
1.2k
views
enrichKEGG function error
cluster
clusterProfiler
KEGG
11 months ago • updated 10 months ago
ruba-mahmoud
• 0
4
votes
3
replies
1.4k
views
SingleCellExperiment: Edit cluster IDs in colLabels
scran
Clustering
SingleCellExperiment
annotate
cluster
updated 20 months ago by
James W. MacDonald
65k • written 20 months ago by
achoppe
▴ 10
0
votes
1
reply
1.7k
views
Is it proper to compare two WGCNA matrixes if they were raised to different power (soft threshold)?
Network
cluster
WGCNA
RNASeq
updated 8 months ago by
James W. MacDonald
65k • written 8 months ago by
chiwut.wong
• 0
0
votes
3
replies
3.0k
views
RnBeads cannot locate libjasper.so.1
rnbeads
gs
ghostscript
shared libraries
cluster
8.7 years ago
bmreilly
• 0
0
votes
0
replies
664
views
using gene expression matrix for TCseq package to cluster genes
TCseq
microwarray
cluster
counts
normalization
4.7 years ago
bioyas
▴ 10
0
votes
0
replies
570
views
How to perform a cluster analysis in RT-qPCR or HT-qPCR results?
cluster
qpcr
qpcrNorm
clusterProfiler
HTqPCR
17 months ago
Javier
• 0
0
votes
1
reply
1.2k
views
error when genomeFile too big when running Quasr on >3 clusters
quasr
parallel
cluster
8.1 years ago
rna seq
▴ 90
0
votes
0
replies
707
views
Only 1 gene/ feature is present in module after WGCNA analysis
RNASeq
Clustering
cluster
WGCNA
23 months ago
chiwut.wong
• 0
14 results • Page
1 of 1
Recent ...
Replies
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Answer: Merging featureCounts output for different species
by
Michael Love
41k
Bioconductor support site is for posting questions about software. Try biostars.
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Answer: Microarray Limma Model fitting and DEG
by
Gordon Smyth
50k
This dataset seems straightforward to analyse using the original MAS expression values on GEO. MAS expression values are known to be noisy …
Answer: Trimming a section of a scaffold from a genome
by
James W. MacDonald
65k
It's undoubtedly possible, but you don't provide enough information to go on. If I assume you are talking about an existing `BSgenome` pack…
Votes
Answer: DESeq2 "Contrast" option
Answer: error in ChAMP loading file
Circumvent creating .ff files in the working directory when using genotype.Illumina() function
Answer: Problem with maplot {affy} method when using rma {affy} method output as its inp
Answer: Microarray Limma Model fitting and DEG
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