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cnvtools
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Calculate the CNV frequency in a dataset
genomicranges
cnvtools
6.4 years ago
julrodr80
▴ 30
0
votes
0
replies
1.2k
views
crlmm: Does it support Illumina BeadChip platform HumanCore-24v1-0_A
cnv
cnvtools
crlmm
7.6 years ago
enriquev
• 0
0
votes
1
reply
1.5k
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CopywriteR: CNV calling on normals samples / gaps in chromosomes
copynumber
cnvtools
cnv
copywriteR
updated 7.7 years ago by
t.kuilman
▴ 170 • written 7.7 years ago by
ahinsahr11
• 0
0
votes
4
replies
1.9k
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Using cn.MOPs to estimate CNVs in tumors without reference normal
cn.mops
cnvtools
tcga cnv
updated 8.4 years ago by
Günter Klambauer
▴ 540 • written 8.4 years ago by
vakul.mohanty
▴ 10
2
votes
2
replies
1.7k
views
Adjusting the defaults in the cn.MOPs Package
cn.mops
cnv
cnvtools
updated 8.7 years ago by
Günter Klambauer
▴ 540 • written 8.7 years ago by
voksdvoks
• 0
2
votes
8
replies
2.3k
views
Copy Number Variation in the cn.mops Package
cn.mops
cnv
cnvtools
updated 8.7 years ago by
Martin Morgan
25k • written 8.7 years ago by
bioconductor
• 0
0
votes
1
reply
886
views
CNVtools installation error - not available
CNVtools
CNVtools
updated 14.1 years ago by
Sean Davis
21k • written 14.1 years ago by
Bryan Hepworth
▴ 30
0
votes
0
replies
844
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CNVtools/snpMatrix
CNVtools
CNVtools
14.4 years ago
Vincent Plagnol
▴ 10
8 results • Page
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Recent ...
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Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Answer: Merging featureCounts output for different species
by
Michael Love
41k
Bioconductor support site is for posting questions about software. Try biostars.
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Answer: Microarray Limma Model fitting and DEG
by
Gordon Smyth
50k
This dataset seems straightforward to analyse using the original MAS expression values on GEO. MAS expression values are known to be noisy …
Answer: Trimming a section of a scaffold from a genome
by
James W. MacDonald
65k
It's undoubtedly possible, but you don't provide enough information to go on. If I assume you are talking about an existing `BSgenome` pack…
Votes
Answer: DESeq2 "Contrast" option
Answer: error in ChAMP loading file
Circumvent creating .ff files in the working directory when using genotype.Illumina() function
Answer: Problem with maplot {affy} method when using rma {affy} method output as its inp
Answer: Microarray Limma Model fitting and DEG
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