Showing : codelink • reset
7
votes
9
replies
1.7k
views
codelink package is not installing
codelink r
9.0 years ago Agaz Hussain Wani ▴ 260
6
votes
6
replies
1.8k
views
Can i set a path for readCodlinkSet()
r differential expression codelink
updated 8.8 years ago by ▴ 760 • written 8.9 years ago by ▴ 260
5
votes
2
replies
1.1k
views
Codelink annotation error in Ubuntu 16.04
codelink annotation ubuntu
updated 7.4 years ago by 25k • written 7.4 years ago by ▴ 260
4
votes
4
replies
2.4k
views
Annotation package for Codelink 55K Human Array
r annotation codelink
updated 8.8 years ago by ▴ 760 • written 8.8 years ago by ▴ 260
4
votes
4
replies
1.4k
views
Differential expression on codelink data
r codelink differential expression
updated 8.9 years ago by ▴ 760 • written 8.9 years ago by ▴ 260
4
votes
2
replies
1.3k
views
How to check if the microarray data is from codelink
codelink microarray
updated 6.3 years ago by 21k • written 6.3 years ago by ▴ 260
3
votes
26
replies
4.3k
views
How to prepare targets.txt file in codelink.
r codelink
updated 9.0 years ago by ▴ 760 • written 9.0 years ago by ▴ 260
3
votes
18
replies
2.8k
views
Annotating codelink data file
r codelink annotation annotationdbi
updated 9.0 years ago by ▴ 760 • written 9.0 years ago by ▴ 260
2
votes
5
replies
1.4k
views
How to process Codelink UniSet Rat I Bioarray data
codelink
updated 6.1 years ago by ▴ 760 • written 6.1 years ago by ▴ 260
2
votes
5
replies
1.7k
views
Codelink differential expression and annotation
r codelink differential expression hwgcod
updated 8.9 years ago by ▴ 760 • written 8.9 years ago by ▴ 260
1
vote
2
replies
1.1k
views
problem of codelink
codelink
updated 9.2 years ago by ▴ 760 • written 9.2 years ago by ▴ 10
1
vote
0
replies
1.2k
views
new codelink annotation packages.
Annotation r10kcod probe codelink Annotation r10kcod probe codelink
17.8 years ago Diego Diez ▴ 760
0
votes
0
replies
926
views
problem with chromosome location in annotations WAS: search archives and annnotate questions
Annotation GO annotate affy AnnBuilder codelink Annotation GO annotate affy AnnBuilder
18.0 years ago Diego Diez ▴ 760
0
votes
3
replies
1.1k
views
annotations for Codelink arrays
Annotation GO Cancer r10kcod probe AnnBuilder PROcess biomaRt codelink Annotation GO
updated 17.1 years ago by ▴ 760 • written 17.1 years ago by ★ 1.2k
0
votes
5
replies
1.3k
views
from using biomaRt and r10kcod
r10kcod probe PROcess convert codelink r10kcod probe PROcess convert codelink
updated 17.0 years ago by ▴ 760 • written 17.0 years ago by ★ 1.2k
0
votes
1
reply
938
views
Human whole genome Codelink arrays and paired analysis
codelink codelink
updated 16.5 years ago by ▴ 760 • written 16.5 years ago by ▴ 30
0
votes
1
reply
1.0k
views
codelink analysis
codelink codelink
updated 15.7 years ago by ▴ 760 • written 15.7 years ago by ▴ 10
0
votes
1
reply
1.1k
views
codelink database submission IDs changing
Annotation codelink Annotation codelink
updated 14.8 years ago by ▴ 760 • written 14.8 years ago by ▴ 30
0
votes
6
replies
1.7k
views
annotation package for platform GPL2890
Annotation annotate codelink Annotation annotate codelink
updated 12.6 years ago by ▴ 150 • written 12.6 years ago by ▴ 380
0
votes
0
replies
975
views
Single channel microarray
codelink codelink
12.5 years ago Niraj Nepal ▴ 20
0
votes
10
replies
1.7k
views
How to get feature ID's from the raw codelink data.
r codelink
9.0 years ago Agaz Hussain Wani ▴ 260
0
votes
3
replies
2.2k
views
Undefined columns selected in codelink R package.
r TXT codelink
8.8 years ago Agaz Hussain Wani ▴ 260
0
votes
1
reply
989
views
data transformation
Normalization vsn codelink Normalization vsn codelink
updated 20.1 years ago by ★ 13k • written 20.1 years ago by ▴ 10
0
votes
1
reply
757
views
log transformation the eset
codelink
updated 3.0 years ago by ★ 3.9k • written 3.0 years ago by • 0
0
votes
0
replies
812
views
Multiple fields in Imagene data files
codelink codelink
20.0 years ago Dick Beyer ★ 1.4k
0
votes
0
replies
1.1k
views
vsn vs quantiles, bimodal data
Normalization vsn codelink Normalization vsn codelink
19.7 years ago Rohit Ghai ▴ 80
0
votes
0
replies
881
views
Comparison of Affymetrix and CodeLink chip
limma codelink limma codelink
19.5 years ago Binita Dutta ▴ 100
0
votes
0
replies
1.0k
views
affy v codelink
affy limma codelink affy limma codelink
19.5 years ago Dick Beyer ★ 1.4k
0
votes
0
replies
898
views
Amersham codelink help?
affy codelink affy codelink
19.5 years ago Luckey, John ▴ 90
0
votes
0
replies
1.1k
views
Integrating Codelink data with bioconductor (using affy and limmafunctions)
Microarray Annotation Normalization affy limma PROcess codelink ASSIGN Microarray affy
19.0 years ago Diego Diez ▴ 760
0
votes
3
replies
1.1k
views
Integrating Codelink data with bioconductor (using affy and limmafunctions)
Microarray Annotation Normalization affy limma PROcess codelink ASSIGN Microarray affy
updated 19.0 years ago by ▴ 760 • written 19.0 years ago by 50k
0
votes
0
replies
931
views
using codelink data on limma
Microarray limma codelink Microarray limma codelink
18.7 years ago Bert Wong ▴ 10
0
votes
5
replies
1.4k
views
annotations for Codelink arrays
Annotation codelink Annotation codelink
updated 18.5 years ago by ★ 2.9k • written 18.5 years ago by ▴ 720
0
votes
1
reply
965
views
limma question
Microarray probe limma codelink Microarray probe limma codelink
updated 18.2 years ago by ▴ 30 • written 18.2 years ago by 65k
0
votes
1
reply
1.2k
views
CodeLink Package: Not a Codelink exported file.
codelink ArrayExpress codelink ArrayExpress
updated 18.0 years ago by ▴ 760 • written 18.1 years ago by ▴ 600
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Comment: DESeq2 output used for PCA plot on R studio by Kevin Blighe ★ 3.9k
This comment helps.
Comment: DESeq2 output used for PCA plot on R studio by Kevin Blighe ★ 3.9k
I am not sure how your comment helps here?
Answer: DESEQ2 IHW and Apelgm method for Shrinkage (adding s values to FDR) by Michael Love 41k
> I got many p values that had "1.000000e+00" and padj "1" and stat of "0" when I added the Log threshold of LFC >1 and LFC < -1...is this …
Comment: Trying to use enrichGO by fernanda.backsouza ▴ 10
With all my love, thank you Guido, GOxploreR beeing a big ally for me. I don't know how to be grateful right now.
Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k
You didn't generate it with an experiment, you made it up: Your PCA doesn't look like a good RNASeq experiment, because it's not.
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A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Answer: Interpret plot from DiffBind
Answer: How to retrieve gene ontology GO class from gene list?
Answer: How to retrieve gene ontology GO class from gene list?
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