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Gviz: UcscTrack and "GC Percent" information
Gviz
coMET
16 months ago • updated 6 months ago
Daniel E. Weeks
▴ 30
0
votes
0
replies
630
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"> example(coMET)" returns error in snpBiomart() call
comet
6.1 years ago
h.draisma
• 0
0
votes
1
reply
828
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"> example(coMET)" returns error in genesENSEMBL() call
comet
updated 6.1 years ago by
Tiphaine Martin
▴ 40 • written 6.1 years ago by
h.draisma
• 0
0
votes
3
replies
982
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ENCODE examples from vignette do not work (missing data?)
coMET
updated 6.4 years ago by
Tiphaine Martin
▴ 40 • written 6.8 years ago by
rdmorin
• 0
1
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1
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1.5k
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Gviz - UcscTrack
gviz
Comet
updated 6.4 years ago by
Tiphaine Martin
▴ 40 • written 7.2 years ago by
cardenasca
▴ 40
5 results • Page
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Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Seyram M.
• 0
Dear Michael, I tried all three ways (the orIginal, increasing the number of required samples,and subsetting (the countdata and metadata be…
Comment: DESeq2 - dispersion estimation when there is none
by
Michael Love
41k
The red line does assume that shape but the fact the black points show that pattern is discussed in the 2014 paper. > Some caution is warr…
Comment: Error for AnnotationForge makeOrgPackageFromNCBI function
by
James W. MacDonald
65k
I don't really follow what you are saying. All you have to do is delete the NCBI.sqlite db and *re-run the script exactly as you did above.…
Comment: Methylation Analysis experiment design using Limma
by
hortense96
• 0
Thank you very much for your reply and your suggestion, as I'm having a bit of trouble finding information on how to manage this part of th…
Comment: Limma design with continuous and categorical covariates
by
hortense96
• 0
Hello, I'm trying to do a differential methylation analysis with the Limma package and was wondering if you had any suggestions on how to …
Votes
Comment: DESeq2 - dispersion estimation when there is none
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
Answer: OrgDb for maize
Answer: DESeq2 - dispersion estimation when there is none
Comment: Cannabis and KEGGgraph
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