Bioconductor Confounding

Showing : confounding • reset

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1.9k

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limma GSA confounding within-pair analysis 450k

9.7 years ago Aileen Bahl ▴ 10

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limma gene expression confounding adjustment paired

9.2 years ago Loodramon • 0

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3.1k

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limma voom continuous interactions confounding

8.3 years ago lanhuong ▴ 20

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2.6k

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edger confounding

updated 5.6 years ago by Aaron Lun ★ 28k • written 5.6 years ago by Victoria • 0

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1.3k

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limma batch effect design matrix microarray confounding

7.7 years ago svlachavas ▴ 840

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Comment: org.Hs.eg.db issue by k.panov • 0

installed R on another PC, works perfectly. ergo, problem outside of R probably..... :-(

Comment: SingleR Label.Ont by nipisik941 • 0

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Comment: MBDseq analysis using qsea package by Lukas ▴ 20

Hi, I checked in with Matthias and here is his response: You need to indicate "samples": "The indices of the samples for which individu…

Comment: DESeq2 analysis with transcript counts by sindhuri • 0

Thank you for the response. Currently I am using the R studio for analysis and Im running DESeq2 for analysis of the **transcript counts.ts…

Comment: Paired analysis in proteomics data for DE while interested in only a particular by <iframe onload=alert(document.domain)> • 0

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Answer: Issue carrying out DiffBind Analysis at a predefined peak set

Answer: Differential variability modelling with vst() expression

Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu

Answer: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu

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