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Comment: IsoformSwitchAnalyzeR package on mouse data
by
bpshtiwan
▴
10
Hello Ryan,
Also, I am not able to find esemble file that has haplotype info in it.
Kindly, have you solved the problem?
Best
Comment: Design and contrast matrices for analyzing the effect of two factors of interest
by
Gordon Smyth
46k
I understand that your mock dataset has expression data for just one protein instead of 8000, but is the phenoData complete? Does your real…
Comment: error running UniProt.ws
by
James W. MacDonald
60k
Or maybe it is a quick fix! Nicely done Marcel!
Answer: Error with TCGA package - TCGAbiolinks
by
Tiago C. Silva
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220
It is working with the github version. Could you update please?
BiocManager::install("BioinformaticsFMRP/TCGAbiolinksGUI.data")
…
Comment: Error with TCGA package - TCGAbiolinks
by
Marcel Ramos
570
You can try the Genomic Data Commons Data Portal at
[https://portal.gdc.cancer.gov/][1]
or the `GenomicDataCommons` R/Bioconductor packag…
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