Bioconductor Copywriter

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copywriter slurm openMPI

updated 8.2 years ago by t.kuilman ▴ 170 • written 8.2 years ago by smcnulty • 0

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CopywriteR copy number

updated 8.2 years ago by t.kuilman ▴ 170 • written 8.2 years ago by smcnulty • 0

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copywriter

8.2 years ago MatthewGField ▴ 10

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bioconductor biocparallel copywriter

updated 6.8 years ago by Martin Morgan 25k • written 6.8 years ago by genomic8328 ▴ 10

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s4vectors copywriter

updated 6.0 years ago by Michael Lawrence ★ 11k • written 6.0 years ago by TriS ▴ 200

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CopywriteR

7.8 years ago Tom ▴ 10

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copynumber cnvtools cnv copywriteR

updated 7.7 years ago by t.kuilman ▴ 170 • written 7.7 years ago by ahinsahr11 • 0

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copywriter

updated 7.1 years ago by t.kuilman ▴ 170 • written 7.1 years ago by filipzembol • 0

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copywriter copynumber

updated 5.6 years ago by t.kuilman ▴ 170 • written 5.6 years ago by magdaaverte • 0

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copywriter cnv

updated 4.0 years ago by oscarkrijgsman ▴ 20 • written 4.0 years ago by Ram ▴ 190

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CopywriteR

updated 8.3 years ago by t.kuilman ▴ 170 • written 8.3 years ago by Felix • 0

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copywriter bin size targeted sequencing

updated 8.2 years ago by t.kuilman ▴ 170 • written 8.2 years ago by sshung • 0

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copywriter dnacopy

updated 8.2 years ago by t.kuilman ▴ 170 • written 8.2 years ago by jcarter • 0

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copywriter

updated 8.2 years ago by t.kuilman ▴ 170 • written 8.2 years ago by jcarter • 0

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copywriter bam

updated 7.9 years ago by t.kuilman ▴ 170 • written 7.9 years ago by thestaroceanster • 0

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CopywriteR

updated 20 days ago by fer_talavera • 0 • written 2.5 years ago by Joshua • 0

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CopywriteR CopyhelpeR

25 days ago • updated 20 days ago fer_talavera • 0

17 results • Page 1 of 1

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Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by James W. MacDonald 65k

Are you commenting on the OP's question, or adding a different question? If the latter, please start a new post rather than piggybacking on…

Answer: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Use `bquote`. See section 4.6 in [the vignette][1]. [1]: https://bioconductor.org/packages/release/bioc/vignettes/EnhancedVolcano/in…

Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by SamGG ▴ 350

I was thinking about removing unwanted variations at the sample level (ie a transformation shared across genes) not at the gene level. Corr…

Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by James W. MacDonald 65k

That's an assumption used for normalization of a sample, not an assumption you can use for an individual model. We always normalize to atte…

Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by SamGG ▴ 350

Is useless the assumption that the majority of genes have no variation in expression (bearing in mind that they are distributed over the en…

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biomaRt error: database disk image is malformed

Comment: biomaRt : No lock file for BiocFileCache

Answer: Cross-species analysis - how to compute the mid parent value?

Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2

Awards • All

Scholar to James W. MacDonald 65k

Supporter to JKim • 0