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Comment: RUVr batch correction doubling number of DEGs
by
Zainab
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0
Thanks Michael! This has really helped me put together my analysis!
Comment: Does it make sense to have so many statistically significant gene differentially
by
Michael Love
39k
Use group in ggplot to connect the pairs.
Answer: DispEsts plot
by
Michael Love
39k
You have a lot of high dispersion genes, check PCA plots, also count plots for the genes with high mean and high dispersion.
Answer: Correct script for featurecounts in Rsubread
by
Gordon Smyth
47k
See
- https://bioconductor.org/packages/release/workflows/vignettes/RnaSeqGeneEdgeRQL/inst/doc/edgeRQL.html#quantifying-read-counts-for-eac…
Comment: Time-course, comparison of two groups
by
boczniak767
▴
720
Thank you very much @gordon-smyth ! I'm very happy that my test for interaction is okay. So I'll try to extend my test experiment to three …
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