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correction
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Do we need to correct any of the data from DESeq2, if we only want to investigate some of the comparisons?
DESeq2
correction
19 months ago
smac97
• 0
2
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reply
647
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Correcting for all the comparisons that have been made in analysis
DESeq2
comparisons
correction
updated 18 months ago by
James W. MacDonald
65k • written 18 months ago by
smac97
• 0
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Comment: geneList error in clusterprofiler
by
Ana
• 0
Ahh thank you, that fixed it!
Answer: geneList error in clusterprofiler
by
Basti
▴ 750
Have a look at the documentation : https://www.rdocumentation.org/packages/clusterProfiler/versions/3.0.4/topics/gseGO geneList argument s…
Comment: Memory errors using read.bismark?
by
Juan Higareda
• 0
Thanks again for your answer, I will try to play a little bit with the parameters. Only one thing, my data are actually CpG methylation :)…
Comment: flowStats Search Error
by
tholmes
• 0
Thank you so much!
Comment: what is the sampleFiles
by
James W. MacDonald
65k
I don't see any sampleFiles argument for any function in that package. Ideally you would at least tell us what function you are using.
Votes
Comment: Memory errors using read.bismark?
Comment: Not fully paired differential gene expression analysis
Comment: [DiffBind] Obtaining normalization factors
Answer: ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with var
Comment: Not fully paired differential gene expression analysis
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