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Answer: Error with FindConservedMarkers()
by
ATpoint
★
2.1k
Seurat is not a Bioconductor package, please browse their documentation, ask at biostars or open an issue at their GitHub if all that doesn…
Answer: How to add pvalue to boxplot?
by
ATpoint
★
2.1k
The support site is for help with Bioconductor. Yours is basic R/ggplot, please search StackOverflow, this has been asked many times before.
Comment: Which input file is used for DGEList in EgdeR?
by
Michael Love
39k
It does output the Salmon files, and it is documented here:
https://nf-co.re/rnaseq/output#pseudo-alignment-and-quantification
The first …
Comment: Which input file is used for DGEList in EgdeR?
by
Michael Love
39k
Does it output Salmon files (directories with `quant.sf` in them)?
That would be the easiest. These files you have above are processed and…
Answer: Log2Fold change interpretation - Continuous predictor variable
by
Michael Love
39k
It can be more sensitive than binary versions, this has been written about in statistical literature.
But most of all I would encourage …
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