Bioconductor Crash

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software error bug crash Gviz

updated 8.6 years ago by florian.hahne@novartis.com ★ 1.6k • written 8.8 years ago by Philip Lijnzaad ▴ 160

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ebimage crash image analysis

updated 9.7 years ago by Andrzej Oleś ▴ 750 • written 9.8 years ago by mk.applebee • 0

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1.9k

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crash SGSeq TxDb makeTxDbFromBiomart TxFeatures

updated 7.5 years ago by Leonard Goldstein ▴ 260 • written 7.5 years ago by oolongoni ▴ 40

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rankprod crash

7.8 years ago bhgyu ▴ 30

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1.6k

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basicRMA crash rma oligo

2.1 years ago Steffen Moeller ▴ 90

5 results • Page 1 of 1

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Comment: Annotation package for Manduca sexta by GA ▴ 10

Thank you!

Comment: Improving performance of edgeR and limma while adjusting for multiple confounder by ATpoint ★ 4.8k

If 2 minutes is inacceptable to you then you can still fall back to limma-trend which should give a dramatic speedup and finish in seconds.…

Comment: getBM from biomaRt inconsistencies found with .gtf files across multiple species by Mike Smith ★ 6.6k

Great, thanks for the update from Ensembl. So the most relevant part of 'Location: Scaffold HG1277_PATCH: 137,021-141,806 forward strand' …

Answer: Improving performance of edgeR and limma while adjusting for multiple confounder by Gordon Smyth 52k

We recommend that you use voomLmFit() instead of voom+lmFit. We are pretty proud of the speed of glmQLFit and voom, and we hadn't expected…

Answer: Merging EPICV1 and V2 betas by James W. MacDonald 68k

It appears that [SeSAMe][1] has functions meant to do that sort of thing. [1]: https://bioconductor.org/packages/release/bioc/vignet…

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Looking for equivalent EPIC chip v1 vs. v2 annotation variables

Properly constructing a hypergeometric test

A: Is logFC a log2 fold change or some other base in scran::findMarkers

Comment: Error in retrieving clinical data

What is the cheapest day to fly on American Airlines? {Ask_Expert}

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