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crispr
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Job:
Research Scientists/Postdoctoral Candidates/Computational Biologists and Programmers excited about computational challenges in modeling CRISPR genome…
CRISPR
SingleCell
Genomics
2.5 years ago
lpinello
• 0
2
votes
3
replies
993
views
Independent filtering of NGS data
independentfiltering
DESeq2
CRISPR
3.2 years ago • updated 3.1 years ago
Rubén
• 0
6
votes
14
replies
1.9k
views
gRNAefficacy calculations in CRISPRseek
crisprseek
crispr
gRNAefficacy
grna
updated 3.6 years ago by
Julie Zhu
★ 4.3k • written 3.6 years ago by
Dawid G. Nowak
▴ 40
1
vote
0
replies
882
views
Job:
Postdoc/Bioinformatician Research Fellow @ Harvard Medical School/MGH/ Boston's Children Hospital
CRISPR
functional genomics
single cell
gene regulatory networks
Job
3.6 years ago
bauer
▴ 10
0
votes
0
replies
944
views
Job:
Scientist 1, Bioinformatics (Research | Berkeley, CA | Full Time)
Bioinformatics
drug-discovery
RNA-seq
CRISPR
Job
3.6 years ago
yzhang
• 0
0
votes
19
replies
2.1k
views
Help with using CRISPRseeker
CRISPR
updated 4.6 years ago by
Julie Zhu
★ 4.3k • written 4.6 years ago by
sharvari gujja
▴ 40
0
votes
2
replies
1.5k
views
Using edgeR to analyze Cripsr/Cas9 Screening data
edger
processamplicons
sgrna
crispr
updated 13 months ago by
hyejo
• 0 • written 6.0 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
4
replies
2.1k
views
Adaptation of DESeq/edgeR model for CRISPR drop-out screen
crispr
edger
deseq
deseq2
updated 6.4 years ago by
Aaron Lun
★ 28k • written 6.4 years ago by
emanuelvgoncalves
• 0
0
votes
1
reply
1.4k
views
EdgeR: run processAmplicons without barcodes
EdgeR
CRISPR
Barcode
processamplicons
updated 5.9 years ago by
sdalin
• 0 • written 7.0 years ago by
neggersjasper
• 0
0
votes
2
replies
1.3k
views
How to start CrispRVariants with fastq file starting point
R
crispr
fastq
7.3 years ago
kfburbach
• 0
1
vote
1
reply
1.3k
views
CRISPRseek R package: description of output fields that are unclear
crisprseek
R
CRISPR
sgRNA
updated 8.2 years ago by
Julie Zhu
★ 4.3k • written 8.2 years ago by
alexgraehl
▴ 20
0
votes
6
replies
1.7k
views
Manipulating random CRISPR sequences
r
crispr
updated 7.8 years ago by
mousheng xu
▴ 10 • written 8.4 years ago by
shane
• 0
2
votes
27
replies
3.8k
views
CRISPRseek package: be aware that as of Oct 2015, CRISPRseek works best for for regions < 200kb
crisprseek
sgrna
crispr
cas9
R
8.5 years ago • updated 8.4 years ago
alexgraehl
▴ 20
13 results • Page
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Recent ...
Replies
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Answer: Merging featureCounts output for different species
by
Michael Love
41k
Bioconductor support site is for posting questions about software. Try biostars.
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Answer: Microarray Limma Model fitting and DEG
by
Gordon Smyth
50k
This dataset seems straightforward to analyse using the original MAS expression values on GEO. MAS expression values are known to be noisy …
Answer: Trimming a section of a scaffold from a genome
by
James W. MacDonald
65k
It's undoubtedly possible, but you don't provide enough information to go on. If I assume you are talking about an existing `BSgenome` pack…
Votes
Answer: DESeq2 "Contrast" option
Answer: error in ChAMP loading file
Circumvent creating .ff files in the working directory when using genotype.Illumina() function
Answer: Problem with maplot {affy} method when using rma {affy} method output as its inp
Answer: Microarray Limma Model fitting and DEG
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