Showing : crlmm • reset
0
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4.6k
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Translating AB/BB/AA into a SNP with Illumina data
SNP crlmm SNP crlmm
updated 11.8 years ago by ▴ 870 • written 11.8 years ago by ▴ 480
11
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23
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2.6k
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crlmm support for Illumina arrays with no annotation package?
crlmm QCarray annotation
updated 4.3 years ago by • 0 • written 4.5 years ago by ▴ 30
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6
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2.5k
views
crlmm : copy number and genotyping of Illumina data
SNP Annotation Normalization crlmm copynumber SNP Annotation Normalization crlmm
updated 9.9 years ago by ▴ 1000 • written 9.9 years ago by ▴ 160
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4
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2.3k
views
genotyping output files
PROcess SNPchip crlmm PROcess SNPchip crlmm
12.3 years ago Rafiq S. ▴ 20
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1
reply
2.1k
views
crlmm : copy number and genotyping of Illumina data
SNP Annotation Normalization crlmm copynumber SNP Annotation Normalization crlmm
updated 10.2 years ago by ▴ 1000 • written 10.2 years ago by ▴ 160
1
vote
6
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2.0k
views
Copy number analysis from Illumina 550K chip
illumina copynumber crlmm
8.5 years ago stuti.agrawal • 0
0
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6
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2.0k
views
CRLMM: Error in quantile.default(M, c(1, 5)/6, names = FALSE)
crlmm
updated 6.9 years ago by ▴ 1000 • written 7.7 years ago by ▴ 120
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2
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2.0k
views
reading .idat files using genotype.Illumina in crlmm
crlmm idat
updated 8.8 years ago by ▴ 1000 • written 8.8 years ago by ▴ 720
1
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5
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1.9k
views
CRLMM on Illumina Human1Mv1_C chips
crlmm illumina beadarraysnp
updated 9.1 years ago by ▴ 1000 • written 9.1 years ago by ▴ 30
0
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1
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1.9k
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Reading Illumina IDAT files
crlmm crlmm
updated 13.8 years ago by ▴ 1000 • written 13.8 years ago by ▴ 910
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5
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1.8k
views
CRLMM: Which array type work with which annotation package
crlmm
updated 7.5 years ago by ▴ 1000 • written 7.5 years ago by ▴ 120
1
vote
1
reply
1.6k
views
crlmm Illumina SNP array genotyping
crlmm oligo
8.2 years ago vladhkim ▴ 10
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3
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1.6k
views
crlmm and cluster centres error
crlmm crlmm
updated 13.6 years ago by ★ 4.3k • written 13.6 years ago by ▴ 50
2
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4
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1.6k
views
Crlmm HumanOmniExpress-24v1 Annotation not available
crlmm
updated 5.8 years ago by • 0 • written 8.7 years ago by ▴ 370
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1
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1.5k
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Copy Number Analysis across multiple SNP array plaforms
SNP Cancer crlmm ffpe SNP Cancer crlmm ffpe
updated 12.0 years ago by ▴ 210 • written 12.0 years ago by ▴ 20
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3
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1.5k
views
Error: All CEL files must be of the same type when running CRLMM
SNP crlmm SNP crlmm
updated 14.8 years ago by 6.7k • written 14.8 years ago by ▴ 50
0
votes
8
replies
1.5k
views
crlmm warning
oligo crlmm oligo crlmm
updated 17.1 years ago by ★ 4.3k • written 17.1 years ago by ▴ 190
0
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6
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1.5k
views
QC Affy 6.0 SNP arrays with crlmm or Oligo?
Normalization oligo crlmm Normalization oligo crlmm
updated 14.1 years ago by ★ 4.3k • written 14.1 years ago by ▴ 150
0
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1
reply
1.5k
views
crlmm and Illumina Infinium arrays
crlmm crlmm
updated 15.0 years ago by ▴ 1000 • written 15.0 years ago by ▴ 170
0
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1
reply
1.5k
views
Crlmm package
SNP Annotation Normalization crlmm SNP Annotation Normalization crlmm
updated 11.1 years ago by ▴ 1000 • written 11.1 years ago by ▴ 400
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2
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1.5k
views
crlmm problem
SNP beadarray crlmm SNP beadarray crlmm
10.2 years ago Aaerp ▴ 40
1
vote
4
replies
1.5k
views
crlmm crossprod error, and missing files in annotation
crlmm
updated 8.7 years ago by ▴ 1000 • written 8.7 years ago by ▴ 370
0
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1
reply
1.4k
views
CRLMM for Affymetrix Axiom Genome-Wide Population-Optimized Human Arrays
crlmm axiom
updated 9.4 years ago by ★ 4.3k • written 9.4 years ago by • 0
1
vote
1
reply
1.4k
views
CRLMM: the leading minor of order 1 is not positive definite
crlmm
7.7 years ago komal.rathi ▴ 120
0
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1
reply
1.4k
views
beadarray illumina Human610-Quadv1_B.bpm
crlmm crlmm
updated 13.7 years ago by ▴ 1000 • written 13.8 years ago by ▴ 80
1
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0
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1.4k
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Recall genotypes from Illumina idat files using crlmm package
crlmm genotype
8.2 years ago nadne ▴ 10
0
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7
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1.4k
views
problem to compute copy number with crlmm
GLAD crlmm GLAD crlmm
updated 14.4 years ago by ▴ 250 • written 14.4 years ago by ▴ 40
1
vote
1
reply
1.4k
views
Circumvent creating .ff files in the working directory when using genotype.Illumina() function
crlmm genotype.Illumina ff
updated 6.2 years ago by • 0 • written 7.7 years ago by ▴ 120
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5
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1.4k
views
crlmm package help for copy number affymetrix snp 6.0
SNP crlmm SNP crlmm
updated 13.8 years ago by ★ 4.3k • written 13.8 years ago by ▴ 60
1
vote
1
reply
1.4k
views
Illumina Infinium Global Screening Array (GSA) v1.0 for CRLMM
crlmm gsa microarray illumina
written 6.0 years ago by • 0
0
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1
reply
1.4k
views
NAs with rawCopynumber() and discrepancies with estimated computed in parallel
crlmm copynumber
9.1 years ago kforner • 0
0
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0
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1.4k
views
how to build a new crlmm CDF annotation package?
crlmm annotation
9.3 years ago Aaron Mackey ▴ 200
0
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4
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1.4k
views
Trouble following the first 5 lines of vanillaICE tutorial?
SNP6 crlmm vanillaice vanillaice crlmm cnv
updated 8.9 years ago by • 0 • written 8.9 years ago by ▴ 20
0
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1
reply
1.3k
views
"genomdat must be numeric" error form DNACopy package
software error dnacopy crlmm
updated 8.8 years ago by 65k • written 8.8 years ago by • 0
0
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2
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1.3k
views
Question on copy number estimation for Affymetrix SNP array 100k and 500k
SNP crlmm genoCN SNP crlmm genoCN
updated 13.6 years ago by ★ 2.4k • written 13.6 years ago by ★ 4.3k
0
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1
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1.3k
views
crlmm - Infinium iSelect HD Custom Genotyping
SNP beadarray crlmm SNP beadarray crlmm
updated 13.3 years ago by ▴ 1000 • written 13.4 years ago by ▴ 20
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0
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1.3k
views
crlmm problem
SNP convert beadarray crlmm SNP convert beadarray crlmm
10.1 years ago Matthias Arnold ▴ 10
1
vote
1
reply
1.3k
views
Error genotyping with CRLMM
crlmm copynumber illumina
updated 8.5 years ago by ▴ 370 • written 8.5 years ago by • 0
0
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3
replies
1.3k
views
cram for new chips
beadarray illumina beadarray crlmm
updated 5.8 years ago by ★ 6.8k • written 5.8 years ago by • 0
0
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0
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1.3k
views
genotype function from crlmm package creates next error "Error in quantile.default(M, c(1, 5)/6, names = FALSE) : missing values and NaN's not allowe…
software error crlmm genotype function
8.2 years ago IOM ▴ 20
0
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0
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1.3k
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Question about using oligo and SNPchip for copy number analysis
SNP Cancer graph oligo SNPchip oligoClasses VanillaICE crlmm SNP Cancer graph oligo
14.9 years ago Min-Han Tan ▴ 40
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0
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1.2k
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crlmm: Does it support Illumina BeadChip platform HumanCore-24v1-0_A
cnv cnvtools crlmm
7.7 years ago enriquev • 0
0
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1
reply
1.2k
views
crlmm Illumina cdfName "human1mv1c" not valid
crlmm crlmm
updated 11.8 years ago by ▴ 250 • written 11.8 years ago by ▴ 10
0
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2
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1.2k
views
Analysis with SnpSet object CRLMM package
crlmm crlmm
updated 12.4 years ago by ★ 4.3k • written 12.4 years ago by ▴ 70
0
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0
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1.2k
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crlmm of other software for oncoscan
Cancer crlmm Cancer crlmm
9.8 years ago Richard Friedman ▴ 80
0
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0
replies
1.2k
views
Illumina CanineHD CNV & crlmm?
GO HapMap cdf affy crlmm GO HapMap cdf affy crlmm
13.4 years ago Matthew Ritchie ▴ 1000
0
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1
reply
1.2k
views
boxplot/histograms on preprocessed SNP affy data with crlmm package
SNP oligo crlmm SNP oligo crlmm
updated 11.8 years ago by ★ 4.3k • written 11.8 years ago by ▴ 840
0
votes
1
reply
1.2k
views
crlmm with Illumina arrays
crlmm crlmm
updated 14.2 years ago by ★ 4.3k • written 14.2 years ago by ▴ 480
0
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1
reply
1.2k
views
(CRLMM) an issue needs to be clarified
SNP affy crlmm SNP affy crlmm
15.1 years ago Ping-Hsun Hsieh ▴ 30
0
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1
reply
1.2k
views
Bug?: crlmm and cdfName not valid
software error crlmm
updated 7.5 years ago by ▴ 1000 • written 7.5 years ago by • 0
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