Showing : ctc • reset
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Finding coding SNPs with predictCoding
SNP ctc SNP ctc
updated 12.2 years ago by ★ 1.7k • written 12.2 years ago by ★ 6.8k
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Query regarding Clustering
Clustering ctc Clustering ctc
updated 14.0 years ago by ▴ 120 • written 14.0 years ago by 21k
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2
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1.2k
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Finding coding SNPs with predictCoding
SNP Annotation BSgenome ctc BSgenome cycle genomes SNP Annotation BSgenome ctc BSgenome
updated 12.1 years ago by ★ 1.7k • written 12.1 years ago by ★ 6.8k
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1.0k
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Errors w/ getBioC(develOK =TRUE) with R2.0 devel
aCGH GO Biobase DynDoc annotate edd genefilter geneplotter rhdf5 multtest ctc ROC affy
19.6 years ago Matthew Hannah ▴ 940
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problems with getBioC() and getBioC(develOK=TRUE) on R 2.0.0
aCGH GO Biobase DynDoc annotate edd genefilter geneplotter rhdf5 multtest ctc ROC affy
19.5 years ago Goeman, J.J. MSTAT ▴ 150
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1.0k
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problems with getBioC() and getBioC(develOK=TRUE) on R 2.0.0
aCGH GO Biobase DynDoc annotate edd genefilter geneplotter rhdf5 multtest ctc ROC affy
19.5 years ago rgentleman ★ 5.5k
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:Export 1 way cluster to treeview
Clustering ctc Clustering ctc
19.4 years ago Anthony Bosco ▴ 500
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1.1k
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Xcluster
Microarray ctc Microarray ctc
18.8 years ago Antoine Lucas ▴ 100
0
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0
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902
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ctc::hc2Newick branch length errors?
ctc ctc
11.1 years ago Narayanan, Manikandan NIH/NIAID [E] ▴ 60
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Queries on the 4x44PreProcess Package
Normalization ctc limma Agi4x44PreProcess Normalization ctc limma Agi4x44PreProcess
15.2 years ago Pedro López Romero ▴ 360
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996
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Updated ctc package available
ctc ctc
21.2 years ago Jeff Gentry ★ 3.9k
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Errors w/ getBioC()
aCGH GO Biobase DynDoc annotate edd genefilter geneplotter rhdf5 multtest ctc ROC affy
19.7 years ago Matthew Hannah ▴ 940
12 results • Page 1 of 1
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Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k
This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…
Comment: DESeq2 output used for PCA plot on R studio by Aaliya • 0
I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…
Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge by shuwangxinze1996 • 0
Hello, I used 48 cpus and 320G of memory to run this program. My bam files size are 7-9G, wonder how much CPU and memory is enough?
Comment: DESeq2 output used for PCA plot on R studio by Kevin Blighe ★ 3.9k
This comment helps.
Comment: DESeq2 output used for PCA plot on R studio by Kevin Blighe ★ 3.9k
I am not sure how your comment helps here?
Votes
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Answer: Interpret plot from DiffBind
Answer: How to retrieve gene ontology GO class from gene list?
Answer: How to retrieve gene ontology GO class from gene list?
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