Bioconductor CuratedMetagenomicData

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software error curatedmetagenomicdata annotationhub experimenthub

updated 6.4 years ago by Levi Waldron 1.1k • written 6.4 years ago by morganx ▴ 10

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curatedmetagenomicdata

updated 4.7 years ago by Levi Waldron 1.1k • written 4.7 years ago by grp2009 • 0

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ExperimentHub curatedMetagenomicData

updated 6.5 years ago by Lucas Schiffer ▴ 240 • written 6.6 years ago by Wolfgang Huber 13k

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biocparallel curatedmetagenomicdata parallel dplyr

updated 6.5 years ago by Martin Morgan 25k • written 6.5 years ago by Lucas Schiffer ▴ 240

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curatedMetagenomicData TreeSummarizedExperiment

21 months ago Davide • 0

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curatedMetagenomicData

updated 13 months ago by Lucas Schiffer ▴ 240 • written 13 months ago by ajgasparrini • 0

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MicrobiomeData curatedMetagenomicData

6 months ago • updated 5 months ago Pauline ▴ 20

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curatedMetagenomicData

updated 10 months ago by Lucas Schiffer ▴ 240 • written 10 months ago by zachary.flamholz • 0

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curatedMetagenomicData

updated 6 months ago by Lucas Schiffer ▴ 240 • written 6 months ago by pd378 • 0

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curatedMetagenomicData

updated 3 months ago by Lucas Schiffer ▴ 240 • written 3 months ago by yingliu3 • 0

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114

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curatedMetagenomicData

updated 10 weeks ago by Lucas Schiffer ▴ 240 • written 12 weeks ago by Sehyun Oh ▴ 10

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curatedMetagenomicData

6 days ago Vitor Heidrich • 0

12 results • Page 1 of 1

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Comment: Remove duplicate genera in DEseq output? by ATpoint ★ 2.9k

This seems to be very specific rather than a general and technical DESeq2 question. See the last point of https://support.bioconductor.org/…

Comment: Use with_go along with other filters in getBM function by RuBBiT0 ▴ 10

Hi @mike-smith , you are correct. I was trying to select the ones that have some GO annotations by using the `with_go` filter. I was confus…

Answer: Can VST-transformed community composition data be expressed as relative abundanc by Michael Love 40k

The point of the VST is to make the data systematically homoskedastic (that is, not systematic trend of variance over mean, but not e.g. fo…

Comment: How to update a package at Bioconductor by ma79 • 0

thanks, just informed the original maintainer to send an email.

Comment: Error: biomaRt has encountered an unexpected server error. by Mike Smith ★ 6.0k

Unfortunately, the BioMart LDS functionality have been flaky for a while now e.g. https://support.bioconductor.org/p/9143401/ , https:/…

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A: GenomicAlignments and mapping CIGAR coordinates

Dispersion plot -Interpretation -DESeq2

Answer: Dispersion Estimates and MA plots

DESeq2: When to split multiple group samples for 'more' accurate sizefactors, dispersions etc.

WGCNA coupled with differential expression analysis: question about baseline module detection

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