Biostar Curatedmetagenomicdata

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ExperimentHub curatedMetagenomicData

updated 6.3 years ago by Lucas Schiffer ▴ 240 • written 6.4 years ago by Wolfgang Huber 13k

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software error curatedmetagenomicdata annotationhub experimenthub

updated 6.3 years ago by Levi Waldron 1.1k • written 6.3 years ago by morganx ▴ 10

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974

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biocparallel curatedmetagenomicdata parallel dplyr

updated 6.3 years ago by Martin Morgan 25k • written 6.3 years ago by Lucas Schiffer ▴ 240

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curatedMetagenomicData

updated 10 months ago by Lucas Schiffer ▴ 240 • written 11 months ago by ajgasparrini • 0

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MicrobiomeData curatedMetagenomicData

3 months ago Pauline ▴ 20

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curatedmetagenomicdata

updated 4.5 years ago by Levi Waldron 1.1k • written 4.5 years ago by grp2009 • 0

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curatedMetagenomicData

updated 1 day ago by Lucas Schiffer ▴ 240 • written 14 days ago by Sehyun Oh ▴ 10

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curatedMetagenomicData TreeSummarizedExperiment

19 months ago Davide • 0

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curatedMetagenomicData

updated 4 months ago by Lucas Schiffer ▴ 240 • written 4 months ago by pd378 • 0

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curatedMetagenomicData

updated 23 days ago by Lucas Schiffer ▴ 240 • written 6 weeks ago by yingliu3 • 0

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213

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curatedMetagenomicData

updated 8 months ago by Lucas Schiffer ▴ 240 • written 8 months ago by zachary.flamholz • 0

11 results • Page 1 of 1

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Answer: Correct script for featurecounts in Rsubread by Gordon Smyth 47k

See - https://bioconductor.org/packages/release/workflows/vignettes/RnaSeqGeneEdgeRQL/inst/doc/edgeRQL.html#quantifying-read-counts-for-eac…

Comment: Time-course, comparison of two groups by boczniak767 ▴ 720

Thank you very much @gordon-smyth ! I'm very happy that my test for interaction is okay. So I'll try to extend my test experiment to three …

Answer: Handling limma usage after running multiple imputation on the covariates with mi by Gordon Smyth 47k

limma is not designed to be used with multiply imputed covariates, so I can't offer a solution that uses the multiple imputes. Averaging t…

Answer: Correct script for featurecounts in Rsubread by James W. MacDonald 62k

Here's the relevant section from `?featureCounts` ``` Value: A list with the following components: counts: a data matrix c…

Comment: Can I run DESeq2 with SMART-Seq data by Assa Yeroslaviz ★ 1.5k

thanks, the filter is the other way around, true 🙈

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A: gene dispersion, what does it mean?

Answer: gene dispersion, what does it mean?

Limma time series spline help

Answer: Correct script for featurecounts in Rsubread

Comment: Time-course, comparison of two groups

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