Bioconductor Customcdf

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870

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gcrma CustomCDF Affyhgu133aExpr limma affy

updated 12 months ago by James W. MacDonald 65k • written 12 months ago by Pratik Mehta ▴ 10

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1.2k

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justrma customCDF segfault

updated 5.2 years ago by Daniel ▴ 10 • written 8.5 years ago by maria.lehtivaara • 0

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3.2k

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customcdf affymetrix microarrays hgu133plus2 affy

6.3 years ago rahil ▴ 30

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1.6k

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oligo brainarray rma customcdf

updated 7.2 years ago by James W. MacDonald 65k • written 7.2 years ago by lcordeiro • 0

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2.5k

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hta customcdf

updated 7.2 years ago by James W. MacDonald 65k • written 7.2 years ago by pbachali ▴ 50

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942

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customcdf R microarray

updated 7.3 years ago by James W. MacDonald 65k • written 7.3 years ago by 12021560-002 • 0

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837

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customcdf

updated 7.3 years ago by James W. MacDonald 65k • written 7.3 years ago by 12021560-002 • 0

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1.7k

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oligo pdinfobuilder pd.mogene.1.1.st customcdf

updated 7.6 years ago by James W. MacDonald 65k • written 8.1 years ago by Guido Hooiveld ★ 3.9k

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1.9k

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sva ComBat customcdf affymetrix microarrays limma

8.2 years ago svlachavas ▴ 830

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2.5k

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microarray oligo cdf customcdf

updated 8.4 years ago by Guido Hooiveld ★ 3.9k • written 8.4 years ago by Nathaniel ▴ 20

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5.6k

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oligo customcdf HTA frma

updated 8.6 years ago by James W. MacDonald 65k • written 8.6 years ago by sanj ▴ 20

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5.2k

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affy oligo customcdf

9.4 years ago • updated 9.1 years ago rishi.dasroy ▴ 20

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1.1k

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Annotation GO CustomCDF cdf gcrma Annotation GO CustomCDF cdf gcrma

updated 14.4 years ago by James W. MacDonald 65k • written 14.4 years ago by Yair Benita ▴ 80

13 results • Page 1 of 1

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Comment: minfi::read.metharray.exp by clacarion • 0

I think its work with `read.metharray.sheet` ```r > sheet <- read.metharray.sheet("/Users/clarachretienneau/Desktop/clock_epigenetic/PJ120…

Comment: minfi::read.metharray.exp by clacarion • 0

Thank you for your response Basti ! I add all the idat files in a unique folder called "idat" and add it in my path ```r > list.files("…

Answer: List of Deprecated Packages for Bioc3.19 by shepherl 3.8k

singleCellTK has been fixed and will remain in Bioconductor

Comment: Trying to use enrichGO by fernanda.backsouza ▴ 10

Yes, I'm working only with genes from terpenoids pathway (14 genes), so I can't use enrichGO? Can you recommend a package or something like…

Comment: Trying to use enrichGO by fernanda.backsouza ▴ 10

Your awnser at Cannabis orgDb solve my problems using enrichGO by far. I'm underdegree biotechnology student, and I learning bioinformatic…

Votes

Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)

Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.

Answer: minfi::read.metharray.exp

Comment: Trying to use enrichGO

Answer: Cannabis OrgDb

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