Bioconductor Data.frame

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subjunc data.frame myExons Rsubread

updated 10 months ago by ATpoint ★ 4.0k • written 10 months ago by Sukeerthi • 0

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590

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Rscript data.frame forloop R

3.7 years ago Ankit ▴ 20

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data.frame tcga reshape data

updated 4.9 years ago by Steve Lianoglou ★ 13k • written 4.9 years ago by mario.zanfardino ▴ 160

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software error limma data.frame

updated 5.6 years ago by Gordon Smyth 50k • written 5.6 years ago by azmir004 • 0

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971

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data.frame read.table

updated 6.1 years ago by davide risso ▴ 950 • written 6.1 years ago by viviana.marin-esteban • 0

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978

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R noiseq data.frame

6.2 years ago aokoro • 0

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annotationhub roadmap project rpkm data.frame

7.5 years ago wcstcyx ▴ 30

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sushi plotBed data.frame

8.0 years ago waqasnayab • 0

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flowcore transform data.frame

updated 8.0 years ago by Jiang, Mike ★ 1.3k • written 8.0 years ago by Julia ▴ 20

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granges data.frame sort

updated 8.5 years ago by Michael Lawrence ★ 11k • written 8.5 years ago by igor ▴ 40

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867

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data.frame

updated 8.6 years ago by Ryan C. Thompson ★ 7.9k • written 8.6 years ago by qiuworld.ou • 0

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1.6k

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EdgeR data.frame glmLRT

updated 8.7 years ago by Gordon Smyth 50k • written 8.7 years ago by amoltej ▴ 10

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Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10

Hi Michael, thanks for the answer! I'll have a look : )

Comment: DESeq filtering specific to contrasts by Michael Love 41k

It will likely not filter it out, but really the per-dataset details would affect the results.

Comment: DESeq filtering specific to contrasts by Carlin95 • 0

Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…

Comment: FilterByExpr low counts with small sample size by Jonathan ▴ 10

Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…

Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Seyram M. • 0

Thank you very much for your reply! I will do so. Kind regards, Seyram

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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

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Popular Question to James W. MacDonald 65k