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data.frame
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0
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2
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515
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'Killed' error during RNAseq alignment
subjunc
data.frame
myExons
Rsubread
updated 9 months ago by
ATpoint
★ 4.0k • written 9 months ago by
Sukeerthi
• 0
0
votes
1
reply
576
views
?? Any R script for subtracting multiple controls from multiple patients in data.frame and assign 1 if output is less than 0
Rscript
data.frame
forloop
R
3.7 years ago
Ankit
▴ 20
1
vote
1
reply
1.2k
views
TCGA isoform expression quantification file - how to reshape data
data.frame
tcga
reshape data
updated 4.9 years ago by
Steve Lianoglou
★ 13k • written 4.9 years ago by
mario.zanfardino
▴ 160
0
votes
1
reply
713
views
Error in data.frame for limmaCtData function
software error
limma
data.frame
updated 5.5 years ago by
Gordon Smyth
50k • written 5.5 years ago by
azmir004
• 0
0
votes
1
reply
957
views
Workflow Perraudeau F1000 - Bioconductor workflow for scRNA-seq
data.frame
read.table
updated 6.0 years ago by
davide risso
▴ 950 • written 6.0 years ago by
viviana.marin-esteban
• 0
0
votes
0
replies
964
views
NOISeq: Need help with my data frame
R
noiseq
data.frame
6.2 years ago
aokoro
• 0
3
votes
2
replies
1.6k
views
AnnotationHub: A RPKM data.frame of Epigenomics RoadMap Project seems strange
annotationhub
roadmap project
rpkm
data.frame
7.5 years ago • updated 7.4 years ago
wcstcyx
▴ 30
0
votes
1
reply
1.1k
views
plotBed R data frame - last line plotted with line 1
sushi
plotBed
data.frame
7.9 years ago
waqasnayab
• 0
6
votes
3
replies
3.3k
views
How to transform cytometry data from CSV and not FCS file?
flowcore
transform
data.frame
updated 8.0 years ago by
Jiang, Mike
★ 1.3k • written 8.0 years ago by
Julia
▴ 20
3
votes
3
replies
1.4k
views
Sorting data frame derived from GRanges
granges
data.frame
sort
updated 8.4 years ago by
Michael Lawrence
★ 11k • written 8.4 years ago by
igor
▴ 40
2
votes
2
replies
854
views
Error when add `in` column into data.frame
data.frame
updated 8.5 years ago by
Ryan C. Thompson
★ 7.9k • written 8.5 years ago by
qiuworld.ou
• 0
2
votes
6
replies
1.6k
views
edgeR output error and data frame setting
EdgeR
data.frame
glmLRT
updated 8.6 years ago by
Gordon Smyth
50k • written 8.6 years ago by
amoltej
▴ 10
12 results • Page
1 of 1
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Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Answer: Microarray Limma Model fitting and DEG
by
Gordon Smyth
50k
This dataset seems straightforward to analyse using the original MAS expression values on GEO. MAS expression values are known to be noisy …
Answer: Trimming a section of a scaffold from a genome
by
James W. MacDonald
65k
It's undoubtedly possible, but you don't provide enough information to go on. If I assume you are talking about an existing `BSgenome` pack…
Comment: DEG Filtering
by
Gordon Smyth
50k
I already know that you using CEL files because you need them to perform RMA normalization. Yes, you should follow the advice I have alread…
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Answer: DESeq2 "Contrast" option
Answer: error in ChAMP loading file
Circumvent creating .ff files in the working directory when using genotype.Illumina() function
Answer: Problem with maplot {affy} method when using rma {affy} method output as its inp
Answer: Microarray Limma Model fitting and DEG
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