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2
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15
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3.6k
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BiSeq trimClusters FDR.loc confusion
biseq
fdr
data
results
9.8 years ago • updated 9.7 years ago
mnaymik
▴ 10
2
votes
4
replies
1.7k
views
edgeR, data processing with some missed values
edger
data
analysis
9.6 years ago
Pau Marc Muñoz Torres
▴ 20
1
vote
2
replies
1.4k
views
about transforming a data.frame
data
9.7 years ago
Bogdan
▴ 670
0
votes
1
reply
1.4k
views
Transform data from MoFlo Astrios
transform
flow cytometry
data
updated 8.1 years ago by
SamGG
▴ 360 • written 8.1 years ago by
cr
• 0
2
votes
4
replies
3.3k
views
exporting limma log2 data
limma
export
log2
data
agilent
updated 10.3 years ago by
James W. MacDonald
68k • written 10.3 years ago by
Jahn Davik
▴ 110
1
vote
2
replies
2.3k
views
data() doesn't work for fcs files?
flowCore
flowjo
data
updated 10.2 years ago by
Greg Finak
▴ 150 • written 10.2 years ago by
AJC
▴ 10
0
votes
1
reply
1.5k
views
Drug datasets for RNA-seq
rna-seq
data
updated 8.1 years ago by
Gordon Smyth
52k • written 8.1 years ago by
bioinformatics
▴ 20
2
votes
1
reply
1.1k
views
Curated Data Package in Bioconductor
package
data
6.5 years ago
divyswar01
• 0
0
votes
3
replies
2.8k
views
[ExpressionSet] Question: Error in validObject(.Object)
ExpressionSet
Assay
NanoString
Error
Data
updated 2.6 years ago by
James W. MacDonald
68k • written 2.6 years ago by
junli1988
• 0
0
votes
1
reply
1.4k
views
Help With TCGAbiolinks package
TCGAbiolinks
data
normalize
l
updated 3.5 years ago by
Kevin Blighe
★ 4.0k • written 3.5 years ago by
DANIELA
• 0
0
votes
1
reply
785
views
Data visualization
HELP
Data
updated 2.4 years ago by
Guido Hooiveld
★ 4.1k • written 2.4 years ago by
mcclurejenniferc
• 0
0
votes
0
replies
693
views
Prepare data frame of 3 column-lists or matrix of three-column lists from VCF or BAM files
BAM
Segmentation
CINdex
VCF
Data
2.5 years ago
raven1306
• 0
1
vote
0
replies
745
views
Mapping patient dataset onto control dataset
Cytometry
R
Data
2.6 years ago
hamiltond
▴ 10
0
votes
0
replies
1.5k
views
OmicCircos: included UCSC.hg19.chr dataframe is actually hg18 cytobands
omiccircos
bug
hg19
hg18
data
7.8 years ago
matthew.bashton
• 0
0
votes
0
replies
833
views
Data for cellGrowth package
cellGrowth
data
6.8 years ago
muitalegal888
• 0
0
votes
0
replies
1.2k
views
Job:
Hiring Bioinformaticians, Data Engineers, & Computer Scientists @ Flagship Labs 77
data
immunology
software
vaccinology
3.4 years ago
Daniel
• 0
1
vote
2
replies
2.3k
views
Dealing With Package Sizes Greater than 5 MB
data
package submission
BiocCheck
5.5 years ago
j.flesch
▴ 10
17 results • Page
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Answer: DESeq2 adujsted p-value cutoff seemingly not working
by
James W. MacDonald
68k
From `?results' ``` On p-values: By default, independent filtering is performed to select a set of genes for multiple tes…
Comment: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =
by
SofieK
• 0
Thank you, I will try this and see.
Comment: DiffBind - question on the use of filtered or unfiltered input data
by
deltaexploitss
• 0
Data input is the adding of data into a computer. This can take place through an input device such as a keyboard. A user inputs data, which…
Comment: GenomeInfoDbData cannot install in R and warning had non-zero exit status
by
Renuka
• 0
how you did it pls explain
Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =
by
James W. MacDonald
68k
If I understand correctly, you want to assess differential transcript abundances. If so, there are a couple of ways you can do that. One wa…
Votes
A: Effect of lfcThreshold on p-value in DESeq2
Answer: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
What benchmark should I use for setting the EdgeR filterByExpr min.count parameter?
Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =
Comment: Unused arguments error without used arguments in GSVA?
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