Bioconductor Data

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3.0k

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limma export log2 data agilent

updated 9.5 years ago by James W. MacDonald 65k • written 9.5 years ago by Jahn Davik ▴ 110

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biseq fdr data results

9.0 years ago • updated 8.9 years ago mnaymik ▴ 10

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2.1k

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ExpressionSet Assay NanoString Error Data

updated 21 months ago by James W. MacDonald 65k • written 21 months ago by junli1988 • 0

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flowCore flowjo data

updated 9.4 years ago by Greg Finak ▴ 150 • written 9.4 years ago by AJC ▴ 10

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data package submission BiocCheck

4.7 years ago j.flesch ▴ 10

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1.4k

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edger data analysis

8.8 years ago Pau Marc Muñoz Torres ▴ 20

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1.2k

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omiccircos bug hg19 hg18 data

6.9 years ago matthew.bashton • 0

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1.2k

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rna-seq data

updated 7.3 years ago by Gordon Smyth 50k • written 7.3 years ago by bioinformatics ▴ 10

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1.2k

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data

8.9 years ago Bogdan ▴ 670

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1.1k

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TCGAbiolinks data normalize l

updated 2.7 years ago by Kevin Blighe ★ 3.9k • written 2.7 years ago by DANIELA • 0

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1.1k

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transform flow cytometry data

updated 7.3 years ago by SamGG ▴ 350 • written 7.3 years ago by cr • 0

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924

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package data

5.6 years ago divyswar01 • 0

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841

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data immunology software vaccinology

2.6 years ago Daniel • 0

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701

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cellGrowth data

6.0 years ago muitalegal888 • 0

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561

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HELP Data

updated 19 months ago by Guido Hooiveld ★ 3.9k • written 19 months ago by mcclurejenniferc • 0

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538

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Cytometry R Data

21 months ago hamiltond ▴ 10

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488

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BAM Segmentation CINdex VCF Data

20 months ago raven1306 • 0

17 results • Page 1 of 1

Recent ...

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Comment: DESeq filtering specific to contrasts by Carlin95 • 0

But wouldn't this result in a different gene set for each analysis stratification? How can you then compare if maybe gene x comes up in Tim…

Comment: Reading huge bismark coverage files using bbseq::read.bismark by jacques.imbert • 0

Hello, Using nThread = 1L fixed the issue. Thank you for your time and help.

Comment: Error in champ.load(): The following specified files do not exist by Basti ▴ 760

The error stems from the Basename column, please see solution here : https://support.bioconductor.org/p/p132482/

Comment: FilterByExpr low counts with small sample size by Gordon Smyth 50k

As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…

Comment: Batch correction and repeated measures by Gordon Smyth 50k

In your code, it was clear that `expr.mat` was a matrix rather than a DGEList, so it has to be a count matrix. If you have a DGEList object…

Votes

Comment: Reading huge bismark coverage files using bbseq::read.bismark

Answer: Reading huge bismark coverage files using bbseq::read.bismark

Answer: How many of my genes from my gene list are in each KEGG pathway?

Comment: Light difference when using coef vs omit a group when compare 3 groups.

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