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david
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Bioconductor package to access DAVID tool
DAVID
updated 2.6 years ago by
shepherl
3.8k • written 2.6 years ago by
deepue
▴ 10
0
votes
0
replies
847
views
RDAVIDWebService - unable to use getFunctionalAnnotationChart with "count = 0"
rdavidwebservice
david
5.7 years ago
rdalbanus
• 0
1
vote
4
replies
1.3k
views
Upregulation and Downregulation of Gene Ontology terms
microarray
david
differential gene expression
GO
6.0 years ago
seendey16
• 0
0
votes
0
replies
1.3k
views
gene over-representation analysis with custom background
pathway analysis
over-representation analysis
DAVID
pantherDB
consensuspathDB
7.3 years ago
smt8n
• 0
1
vote
0
replies
1.0k
views
How can I connect to DAVID 6.8 Beta through RDAVIDWebService
RDAVIDWebService
david
7.7 years ago
umut.caglar
▴ 10
13
votes
35
replies
16k
views
RDAVIDWebService Error 301: Moved Permanently
rdavidwebservice
david
updated 5.7 years ago by
gevermalc
• 0 • written 8.7 years ago by
Vivek.b
▴ 100
3
votes
8
replies
10k
views
RDAVIDWebService - Unable to sendViaPost to url etc etc - server time out
software error
david
rdavidwebservice
updated 8.6 years ago by
oops324
• 0 • written 9.0 years ago by
TriS
▴ 200
0
votes
1
reply
1.7k
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RDAVIDWebService Package - Uploading a gene list using data()
rdavidwebservice
david
differential gene expression
annotation
updated 9.2 years ago by
Dan Tenenbaum
★ 8.2k • written 9.2 years ago by
hpw9
• 0
8 results • Page
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Answer: New genes that did not exist in dds object suddenly showed up after degPatterns
by
Michael Love
41k
May be documented by the software you are using? https://github.com/lpantano/DEGreport
Answer: Doing comparison of RNA-seq data using Deseq2
by
Michael Love
41k
Take a look at our workflow, this starts from a beginner's level. You could export from Excel using CSV or TSV, then read into R. htt…
Answer: WGCNA: analysis of complex trait associations with regressions
by
James W. MacDonald
65k
This support site is meant to help people with questions about Bioconductor packages (WGCNA is not a Bioconductor package). You might try o…
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
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A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
DESeq2 normalization vs VST vs rlog
Answer: DESeq2 "Contrast" option
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