Showing : db0 • reset
0
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1.7k
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problem with AnnotationDbi
ChipName db0 affy Category AnnotationDbi ChipName db0 affy Category AnnotationDbi
updated 15.5 years ago by 16k • written 15.5 years ago by ▴ 830
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995
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Add new affy organism platform
Microarray Annotation Organism cdf db0 probe annotate affy Microarray Annotation cdf
updated 10.9 years ago by ★ 7.2k • written 10.9 years ago by ▴ 50
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2
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2.0k
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problem with makeOrgPackageFromNCBI (for Chinese hamster)
Annotation GO db0 PROcess Annotation GO db0 PROcess
updated 10.7 years ago by ★ 7.2k • written 10.7 years ago by ★ 3.9k
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2
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1.7k
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GO terms for E. coli micro arrays (ecoliK12.db generation)
Annotation GO Yeast db0 probe topGO AnnotationDbi Annotation GO Yeast db0 probe topGO
updated 14.9 years ago by ★ 7.2k • written 14.9 years ago by ▴ 20
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1
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1.0k
views
memory corruption in make.cdf.package() reading binary CDF with BioC 2.3
cdf db0 cdf db0
updated 15.4 years ago by ★ 13k • written 15.4 years ago by ▴ 10
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1
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1.1k
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building an annotation library from scratch
miRNA Annotation Organism db0 AnnotationDbi microRNA miRNA Annotation Organism db0
updated 14.5 years ago by ★ 7.2k • written 14.5 years ago by ▴ 610
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2
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1.3k
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GO over representation analysis
Annotation Pathways GO Organism db0 AnnBuilder PROcess maanova AnnotationDbi Annotation
updated 15.6 years ago by ▴ 220 • written 15.6 years ago by ★ 7.2k
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1
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931
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News: Bioconductor 3.12 db0s, OrgDbs and TxDbs now available
annotation db0 news release News
3.5 years ago kayla.interdonato ▴ 160
1
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0
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812
views
News: Bioconductor 3.13 db0s, OrgDbs and TxDbs now available
annotation release db0
2.9 years ago kayla.interdonato ▴ 160
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0
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616
views
News: Bioconductor 3.16 db0s, OrgDbs and TxDbs now available
release db0 annotation
18 months ago kayla.interdonato ▴ 160
0
votes
1
reply
784
views
News: Bioconductor 3.15 db0s, OrgDbs and TxDbs now available
annotation release db0
2.0 years ago • updated 24 months ago kayla.interdonato ▴ 160
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0
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124
views
Join BOC Sciences at Drug Discovery Chemistry
alabaster.schemas db0
5 weeks ago bocsci11 • 0
1
vote
0
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357
views
News: Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available
db0 release Annotation
6 months ago kayla.interdonato ▴ 160
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0
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624
views
News: Bioconductor 3.17 db0s, OrgDbs, and TxDbs now available
release db0 Annotation
13 months ago kayla.interdonato ▴ 160
0
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0
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912
views
hyperGTest, different Results using different annotation packages
Microarray Annotation GO ChipName db0 GOstats Category Microarray Annotation GO ChipName
15.0 years ago Wiebke Iffert ▴ 20
0
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0
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1.1k
views
building an annotation library from scratch
miRNA Annotation db0 AnnotationDbi miRNA Annotation db0 AnnotationDbi
14.5 years ago Guido Hooiveld ★ 3.9k
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0
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1.4k
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450K annotation: discrepancy between GEO GPL and Bioconductor annotation
Annotation db0 probe annotate PROcess GenomicFeatures GenomicRanges Annotation db0 probe
11.5 years ago Marc Carlson ★ 7.2k
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868
views
ka
Annotation db0 Annotation db0
10.5 years ago Guest User ★ 13k
0
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0
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658
views
News: Bioconductor 3.10 db0s are available
news release annotation db0 deadline News
4.5 years ago kayla.interdonato ▴ 160
0
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0
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656
views
News: Bioconductor 3.11 db0s are available
annotation db0 news release News
4.1 years ago kayla.interdonato ▴ 160
20 results • Page 1 of 1
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Comment: Error in champ.load(): The following specified files do not exist by Basti ▴ 760
The error stems from the Basename column, please see solution here : https://support.bioconductor.org/p/p132482/
Comment: FilterByExpr low counts with small sample size by Gordon Smyth 50k
As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…
Comment: Batch correction and repeated measures by Gordon Smyth 50k
In your code, it was clear that `expr.mat` was a matrix rather than a DGEList, so it has to be a count matrix. If you have a DGEList object…
Comment: Methylation Analysis experiment design using Limma by Gordon Smyth 50k
I don't analyse methylation arrays so cannot advise on specific limma settings for that type of data. Please follow the advice of the methy…
Comment: Light difference when using coef vs omit a group when compare 3 groups. by Chris • 0
Hi Gordon, thank you so much for further guidance! I discussed this issue with psychology doctor who treat Alzheimer patients and they don'…
Votes
Answer: How many of my genes from my gene list are in each KEGG pathway?
Comment: Light difference when using coef vs omit a group when compare 3 groups.
DESeq2 variance transformation error and plot dispersion Estimate
A: DESeq2 variance transformation error and plot dispersion Estimate
ensembl to hgnc symbols creates duplicates
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