Showing : db0 • reset
1
vote
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360
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News: Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available
db0 release Annotation
6 months ago kayla.interdonato ▴ 160
1
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0
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813
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News: Bioconductor 3.13 db0s, OrgDbs and TxDbs now available
annotation release db0
3.0 years ago kayla.interdonato ▴ 160
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1
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1.0k
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memory corruption in make.cdf.package() reading binary CDF with BioC 2.3
cdf db0 cdf db0
updated 15.4 years ago by ★ 13k • written 15.4 years ago by ▴ 10
0
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912
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hyperGTest, different Results using different annotation packages
Microarray Annotation GO ChipName db0 GOstats Category Microarray Annotation GO ChipName
15.0 years ago Wiebke Iffert ▴ 20
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2
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1.7k
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GO terms for E. coli micro arrays (ecoliK12.db generation)
Annotation GO Yeast db0 probe topGO AnnotationDbi Annotation GO Yeast db0 probe topGO
updated 14.9 years ago by ★ 7.2k • written 14.9 years ago by ▴ 20
0
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1.1k
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building an annotation library from scratch
miRNA Annotation db0 AnnotationDbi miRNA Annotation db0 AnnotationDbi
14.5 years ago Guido Hooiveld ★ 3.9k
0
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1
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1.1k
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building an annotation library from scratch
miRNA Annotation Organism db0 AnnotationDbi microRNA miRNA Annotation Organism db0
updated 14.5 years ago by ★ 7.2k • written 14.5 years ago by ▴ 610
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0
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1.4k
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450K annotation: discrepancy between GEO GPL and Bioconductor annotation
Annotation db0 probe annotate PROcess GenomicFeatures GenomicRanges Annotation db0 probe
11.5 years ago Marc Carlson ★ 7.2k
0
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1
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995
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Add new affy organism platform
Microarray Annotation Organism cdf db0 probe annotate affy Microarray Annotation cdf
updated 10.9 years ago by ★ 7.2k • written 11.0 years ago by ▴ 50
0
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2
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2.0k
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problem with makeOrgPackageFromNCBI (for Chinese hamster)
Annotation GO db0 PROcess Annotation GO db0 PROcess
updated 10.7 years ago by ★ 7.2k • written 10.7 years ago by ★ 3.9k
0
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0
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868
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ka
Annotation db0 Annotation db0
10.6 years ago Guest User ★ 13k
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658
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News: Bioconductor 3.10 db0s are available
news release annotation db0 deadline News
4.5 years ago kayla.interdonato ▴ 160
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0
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656
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News: Bioconductor 3.11 db0s are available
annotation db0 news release News
4.1 years ago kayla.interdonato ▴ 160
0
votes
1
reply
932
views
News: Bioconductor 3.12 db0s, OrgDbs and TxDbs now available
annotation db0 news release News
3.5 years ago kayla.interdonato ▴ 160
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votes
0
replies
616
views
News: Bioconductor 3.16 db0s, OrgDbs and TxDbs now available
release db0 annotation
18 months ago kayla.interdonato ▴ 160
0
votes
1
reply
784
views
News: Bioconductor 3.15 db0s, OrgDbs and TxDbs now available
annotation release db0
2.0 years ago kayla.interdonato ▴ 160
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0
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124
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Join BOC Sciences at Drug Discovery Chemistry
alabaster.schemas db0
5 weeks ago bocsci11 • 0
0
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2
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1.3k
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GO over representation analysis
Annotation Pathways GO Organism db0 AnnBuilder PROcess maanova AnnotationDbi Annotation
updated 15.6 years ago by ▴ 220 • written 15.6 years ago by ★ 7.2k
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625
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News: Bioconductor 3.17 db0s, OrgDbs, and TxDbs now available
release db0 Annotation
13 months ago kayla.interdonato ▴ 160
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1
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1.7k
views
problem with AnnotationDbi
ChipName db0 affy Category AnnotationDbi ChipName db0 affy Category AnnotationDbi
updated 15.5 years ago by 16k • written 15.5 years ago by ▴ 830
20 results • Page 1 of 1
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Comment: Differential peaks that were not identified in diffbind were identified in diseq by ATpoint ★ 4.0k
As expected normalization is **way** off, meaning in simple terms that the cloud is too high. The deep-blue area should be along y=0. Try t…
Comment: Differential peaks that were not identified in diffbind were identified in diseq by lonn • 0
Thank you for your suggestions! Here is the MA plot: ![enter image description here][1] I tried several normalization methods with DiffBi…
Answer: OrgDb for maize by Guido Hooiveld ★ 3.9k
I notice the data you are working with is based on `ensembl` ids. This is important, because the `OrgDb` are annotation databases that are …
Comment: Theoretical WGCNA Question by Garrett • 0
Thanks Peter!
Comment: FGSEA pre-ranked input in increasing order or decreasing by sropri • 0
Thank you!
Votes
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
Comment: DEXSeq DEXSeqDataSet count matrix duplication
Comment: Error in champ.load(): The following specified files do not exist
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