Bioconductor Dbsnp

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dbSNP

updated 23 months ago by James W. MacDonald 65k • written 23 months ago by Krithika • 0

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787

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BSgenome dbSNP T2T-CHM13v2.0 SNPlocs

2.0 years ago Hervé Pagès 16k

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1.4k

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SNPlocs SNP dbsnp

7.2 years ago Ramiro Magno ▴ 100

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1.6k

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dbsnp

updated 8.4 years ago by Hervé Pagès 16k • written 8.4 years ago by y-kuwahara • 0

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1.6k

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customprodb dbsnp refseq varianttools

updated 8.8 years ago by xiaojing.wang ▴ 50 • written 8.8 years ago by kristenbeck527 • 0

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1.7k

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ensembl macaque dbsnp customprodb

updated 8.8 years ago by xiaojing.wang ▴ 50 • written 8.8 years ago by kristenbeck527 • 0

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2.0k

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rsids dbsnp SIFT

updated 9.5 years ago by James W. MacDonald 65k • written 9.5 years ago by anastasiya-terskih ▴ 10

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Answer: Cannabis and KEGGgraph by deeenes ▴ 30

Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…

Answer: RNAseq:Technical replicates from different batches by Gordon Smyth 50k

I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…

Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by russ.bainer ▴ 10

Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…

Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Chris • 0

Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …

Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10

Hi Michael, thanks for the answer! I'll have a look : )

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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

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