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Comment: DESeq2 - groups with biological replicates from the same patient
by
Kevin Blighe
3.9k
Hi Oscar, one cannot have the formula `~Patient + Condition` here. It makes no sense.
Comment: DESeq2 - groups with biological replicates from the same patient
by
Kevin Blighe
3.9k
Hi Oscar, there is no mention to clustering.
Comment: DESeq2 - groups with biological replicates from the same patient
by
Oscar
• 0
I would be pretty worried about leaving solely as ```~condition```. You have clustered data here. Failing to account for clustering can oft…
Comment: DESeq2 - groups with biological replicates from the same patient
by
Oscar
• 0
I find this response rather surprising. Sample1 and Sample2 (for example) are not independent because they are derived from the same patien…
Comment: sesameDataCache is not work properly on my system
by
alyssa-daniel
• 0
Could you please post your code here? I am having a heck of a time trying to get mine to work... and I am newer to R so I am not sure I kno…
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