Bioconductor Dmrcate

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DMRcate

written 4 months ago by Daniel E. Weeks ▴ 30

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815

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Epigenetics EpigeneticsWorkflow DMRcate

6 months ago Jitendra ▴ 10

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252

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DMRcate dmrcate

11 weeks ago chuanjiao6 • 0

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1.3k

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ChAMP DMRcate minfi

updated 15 days ago by Tim Peters ▴ 170 • written 4 months ago by rae.alshammari ▴ 10

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1.0k

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DNAMethylation methylationArrayAnalysis DMRcate MethylationArrayData MethylationArray

updated 11 months ago by Tim Peters ▴ 170 • written 11 months ago by Grace • 0

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458

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miss DMRcate missMethyl

updated 8 months ago by Tim Peters ▴ 170 • written 8 months ago by b.curran • 0

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3.7k

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DMRcate minfi

updated 11 weeks ago by Tim Peters ▴ 170 • written 7.1 years ago by Jenny Drnevich ★ 2.0k

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424

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minfi DMRcate

9 weeks ago mycetes • 0

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DNAMethylation DMRcate

14 days ago Macsue • 0

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118

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DMRcate

10 weeks ago chuanjiao6 • 0

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720

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DMRcate DMR.plot

updated 5 months ago by shepherl 3.8k • written 5 months ago by Chiara • 0

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581

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stattistics epicarray Epigenetics DMRcate

updated 5 months ago by James W. MacDonald 65k • written 5 months ago by Jitendra ▴ 10

12 results • Page 1 of 1

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Answer: OrgDb for maize by Guido Hooiveld ★ 3.9k

I notice the data you are working with is based on `ensembl` ids. This is important, because the `OrgDb` are annotation databases that are …

Comment: Theoretical WGCNA Question by Garrett • 0

Thanks Peter!

Comment: FGSEA pre-ranked input in increasing order or decreasing by sropri • 0

Thank you!

Comment: FGSEA pre-ranked input in increasing order or decreasing by alserg ▴ 240

They are reorder in the decreasing order.

Comment: significant difference of p-values with dream() after updating VariancePartition by Le • 0

Thanks for your reply @gabrielhoffman ! I've been trying to isolate the changes, and v1.32.5 had the same results as v1.33.1 while v1.30.0…

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Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

Comment: DEXSeq DEXSeqDataSet count matrix duplication

Comment: Error in champ.load(): The following specified files do not exist

Answer: Error in read.metharray(basenames = files, extended = extended, verbose = verbos

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Scholar to Peter Hickey ▴ 740