Showing : dmrcate • reset
0
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11
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3.7k
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bug in cpg.annotate() and DMR.plot: bad defaults for what and arraytype arguments
DMRcate minfi
updated 12 weeks ago by ▴ 170 • written 7.1 years ago by ★ 2.0k
2
votes
6
replies
1.3k
views
How to get DMR for Infinium methylation EPIC v2
ChAMP DMRcate minfi
updated 22 days ago by ▴ 170 • written 5 months ago by ▴ 10
1
vote
2
replies
921
views
DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, parametric = FALSE, : NA/NaN/Inf in foreign function call (arg 1)"
DMRcate Gviz
updated 2 days ago by ▴ 170 • written 14 months ago by ▴ 10
0
votes
2
replies
448
views
EPIC array hg38 annotation?
minfi DMRcate
10 weeks ago mycetes • 0
3
votes
4
replies
825
views
DMRcate design
Epigenetics EpigeneticsWorkflow DMRcate
7 months ago Jitendra ▴ 10
0
votes
5
replies
588
views
error while running DMRcate
stattistics epicarray Epigenetics DMRcate
updated 6 months ago by 65k • written 6 months ago by ▴ 10
0
votes
1
reply
465
views
dmrcate needs at least two non-NA values to interpolate
miss DMRcate missMethyl
updated 8 months ago by ▴ 170 • written 8 months ago by • 0
3
votes
2
replies
259
views
Question about DMRcate
DMRcate dmrcate
12 weeks ago • updated 11 weeks ago chuanjiao6 • 0
0
votes
1
reply
726
views
DMR.plot() Error in .local(.Object, ...) : Failed to obtain 'hguid' cookie
DMRcate DMR.plot
updated 6 months ago by 3.8k • written 6 months ago by • 0
8
votes
7
replies
1.1k
views
Why is DMRcate not available for Bioconductor version 3.18?
DMRcate
written 4 months ago by ▴ 30
0
votes
0
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123
views
What is the significance of DMR in DMRcate
DMRcate
11 weeks ago chuanjiao6 • 0
0
votes
0
replies
78
views
DMRcate error need at least two non-NA values to interpolate
DNAMethylation DMRcate
21 days ago Macsue • 0
12 results • Page 1 of 1
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Answer: Reproducibility issue with scran together with lapply and BiocParallel by Aaron Lun ★ 28k
IIRC **BiocParallel** switches to a different RNG when inside its own functions like `bplapply` - specifically L'Ecuyer-CMRG, as opposed to…
Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k
This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…
Comment: DESeq2 output used for PCA plot on R studio by Aaliya • 0
I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…
Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge by shuwangxinze1996 • 0
Hello, I used 48 cpus and 320G of memory to run this program. My bam files size are 7-9G, wonder how much CPU and memory is enough? Thank …
Comment: DESeq2 output used for PCA plot on R studio by Kevin Blighe ★ 3.9k
This comment helps.
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