Bioconductor Dmrcate

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DNAMethylation DMRcate

15 days ago Macsue • 0

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427

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minfi DMRcate

10 weeks ago • updated 9 weeks ago mycetes • 0

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118

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DMRcate

10 weeks ago chuanjiao6 • 0

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253

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DMRcate dmrcate

11 weeks ago chuanjiao6 • 0

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DMRcate

written 4 months ago by Daniel E. Weeks ▴ 30

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ChAMP DMRcate minfi

updated 16 days ago by Tim Peters ▴ 170 • written 4 months ago by rae.alshammari ▴ 10

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stattistics epicarray Epigenetics DMRcate

updated 5 months ago by James W. MacDonald 65k • written 5 months ago by Jitendra ▴ 10

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720

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DMRcate DMR.plot

updated 5 months ago by shepherl 3.8k • written 5 months ago by Chiara • 0

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816

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Epigenetics EpigeneticsWorkflow DMRcate

7 months ago • updated 6 months ago Jitendra ▴ 10

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459

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miss DMRcate missMethyl

updated 8 months ago by Tim Peters ▴ 170 • written 8 months ago by b.curran • 0

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DNAMethylation methylationArrayAnalysis DMRcate MethylationArrayData MethylationArray

updated 11 months ago by Tim Peters ▴ 170 • written 11 months ago by Grace • 0

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3.7k

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DMRcate minfi

updated 11 weeks ago by Tim Peters ▴ 170 • written 7.1 years ago by Jenny Drnevich ★ 2.0k

12 results • Page 1 of 1

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Comment: DESeq filtering specific to contrasts by Michael Love 41k

It will likely not filter it out, but really the per-dataset details would affect the results.

Comment: DESeq filtering specific to contrasts by Carlin95 • 0

Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…

Comment: FilterByExpr low counts with small sample size by Jonathan ▴ 10

Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…

Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Seyram M. • 0

Thank you very much for your reply! I will do so. Kind regards, Seyram

Comment: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0` by isaac.vock • 0

Thank you for your response. I can confirm that setting `-t exon` and/or removing `-s 1` and adding `-O` has no impact on the number of suc…

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Install/Switch between multiple versions of R, Rstudio, and Bioconductor

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

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