Bioconductor Dmrcate

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838

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DMRcate Gviz

updated 14 hours ago by russ.bainer ▴ 10 • written 13 months ago by jose.ramirez1 ▴ 10

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DNAMethylation DMRcate

16 days ago Macsue • 0

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1.3k

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ChAMP DMRcate minfi

updated 17 days ago by Tim Peters ▴ 170 • written 4 months ago by rae.alshammari ▴ 10

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431

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minfi DMRcate

10 weeks ago • updated 9 weeks ago mycetes • 0

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119

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DMRcate

10 weeks ago chuanjiao6 • 0

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253

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DMRcate dmrcate

11 weeks ago chuanjiao6 • 0

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3.7k

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DMRcate minfi

updated 11 weeks ago by Tim Peters ▴ 170 • written 7.1 years ago by Jenny Drnevich ★ 2.0k

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1.1k

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DMRcate

written 4 months ago by Daniel E. Weeks ▴ 30

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582

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stattistics epicarray Epigenetics DMRcate

updated 5 months ago by James W. MacDonald 65k • written 5 months ago by Jitendra ▴ 10

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722

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DMRcate DMR.plot

updated 5 months ago by shepherl 3.8k • written 5 months ago by Chiara • 0

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819

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Epigenetics EpigeneticsWorkflow DMRcate

7 months ago • updated 6 months ago Jitendra ▴ 10

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461

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miss DMRcate missMethyl

updated 8 months ago by Tim Peters ▴ 170 • written 8 months ago by b.curran • 0

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1.0k

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DNAMethylation methylationArrayAnalysis DMRcate MethylationArrayData MethylationArray

updated 12 months ago by Tim Peters ▴ 170 • written 12 months ago by Grace • 0

13 results • Page 1 of 1

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Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Robert Castelo ★ 3.2k

Hi, your `c2` object storing all the gene sets is probably a `list` object, where element names are the names of the pathways given by MSig…

Comment: Differential peaks that were not identified in diffbind were identified in diseq by lonn • 0

I tried the default normalization and got similar results as above. Perhaps I need to try identifying the difference peak without using dif…

Answer: Cannabis and KEGGgraph by deeenes ▴ 30

Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…

Answer: RNAseq:Technical replicates from different batches by Gordon Smyth 50k

I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…

Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by russ.bainer ▴ 10

Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…

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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

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Scholar to Robert Castelo ★ 3.2k

Popular Question to James W. MacDonald 65k