3 months ago
yr542
•
0
2
votes
6
replies
443
views
0
votes
0
replies
257
views
13 months ago
dgrayson
•
0
1
vote
1
reply
710
views
updated 2.6 years ago by
James W. MacDonald
62k
•
written 2.6 years ago by
Julie
•
0
Recent ...
Replies
Comment: Visualization of negative log CPM values
by
Gordon Smyth
47k
Sorry, but some of the things you say are not correct.
> compound B has 2 statistically significant genes that are up-regulated
No, there…
Comment: Visualization of negative log CPM values
by
Sabiha
▴
10
@atpoint OK, are you referring to the `log2(cpm+1)` or `log2(tpm+1)`
Comment: Visualization of negative log CPM values
by
Sabiha
▴
10
@gordonsmyth noted. Related to the graphs above, the table below is the output from `limma`, and compound B has 2 statistically significant…
Comment: Visualization of negative log CPM values
by
Gordon Smyth
47k
> negative scale might perhaps indicate gene is too low to be really expressed.
Yes, negative logCPMs do mean that the gene is expressed a…
Awards
• All
Popular Question to
ioannis.vardaxis
▴
30
Scholar to
Erqiang Hu
▴
50
Popular Question to
Matthew Thornton
▴
350
Scholar to
Hervé Pagès
16k
Popular Question to
Habil Zare
▴
170
Locations
• All
WEHI, Melbourne, Australia, 13 minutes ago
United States, 34 minutes ago
Seattle, WA, United States, 1 hour ago
Melbourne, Australia, 1 hour ago
Japan, 1 hour ago
WEHI, Melbourne, Australia, 13 minutes ago
United States, 34 minutes ago
Seattle, WA, United States, 1 hour ago
Melbourne, Australia, 1 hour ago
Japan, 1 hour ago
Traffic: 214 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6