Biostar Dmrseq

Showing : dmrseq • reset

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373

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dmrseq

updated 22 months ago by keegan ▴ 60 • written 23 months ago by KIR_F • 0

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472

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methylCC deconvolution methylation dmrseq serum

2.8 years ago marcin.bazyliszek • 0

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370

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dmrseq methylation

3.3 years ago sorjuelal • 0

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464

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dmrseq

3.5 years ago Stephanie Hicks ▴ 80

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739

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dmrseq sva DSS

updated 3.6 years ago by keegan ▴ 60 • written 3.6 years ago by gjl • 0

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839

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dmrseq Methylation

updated 3.6 years ago by keegan ▴ 60 • written 3.6 years ago by sorjuelal • 0

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835

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installation problem dmrseq bumphunter

updated 4.2 years ago by shepherl 3.4k • written 4.2 years ago by guy.bioinfo ▴ 10

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1.2k

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dmrseq

updated 4.3 years ago by keegan ▴ 60 • written 4.3 years ago by kuckunniwid • 0

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595

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dmrseq

updated 4.5 years ago by keegan ▴ 60 • written 4.5 years ago by swebb1 • 0

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698

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dmrseq bsseq

updated 4.7 years ago by James W. MacDonald 62k • written 4.7 years ago by Bruno Verstraeten • 0

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974

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dmrseq dmr dmrs bisulfite methylation

updated 4.9 years ago by keegan ▴ 60 • written 5.0 years ago by l.kremer • 0

11 results • Page 1 of 1

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Comment: pathview says my nonmodel species is unknown: "species invalid" by Guido Hooiveld ★ 3.5k

Does a restart of R help? Does a reinstall of the library `png` help? In a fresh R-session, what is the output from `BiocManager::valid()…

Comment: Don't let TopGo to trimm long GO names by James W. MacDonald 62k

Did you not notice that this has been answered *as part of this thread that you posted in?*

Comment: pathview says my nonmodel species is unknown: "species invalid" by nute11a • 0

Hi Luo, thank you so much for your helpful comment. While I was able to get this to work and visualize my interesting KEGG pathways (yay!) …

Comment: Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA) by Wolfgang Huber 13k

Hi Ben, your first step should be to upgrade to the current versions of R and Bioconductor. There is really little point in trouble-shooti…

Answer: Is ther an annotation package for sheep (Ovis aries) by Guido Hooiveld ★ 3.5k

Yes, there is! An `EnsDb` for sheep can be obtained through the so-called `AnnotationHub`. See James' and my posts in the thread linked t…

Votes

FDR and padj in deseq and edger

Comment: Mutect version, matched normal and manual curation in PureCN

Answer: Is ther an annotation package for sheep (Ovis aries)

Is ther an annotation package for sheep (Ovis aries)

Awards • All

Scholar to James W. MacDonald 62k

Commentator to Michael Love 39k