Bioconductor Dmrseq

Showing : dmrseq • reset

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297

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dmrseq bsseq

updated 19 hours ago by Peter Hickey ▴ 740 • written 8 days ago by Juan Higareda • 0

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438

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dmrseq

updated 7 months ago by keegan ▴ 60 • written 11 months ago by giancarlo.castellano • 0

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700

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dmrseq

updated 3.1 years ago by keegan ▴ 60 • written 3.1 years ago by KIR_F • 0

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865

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methylCC deconvolution methylation dmrseq serum

4.0 years ago marcin.bazyliszek • 0

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673

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dmrseq methylation

4.5 years ago sorjuelal • 0

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714

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dmrseq

4.7 years ago Stephanie Hicks ▴ 80

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1.3k

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dmrseq sva DSS

updated 4.8 years ago by keegan ▴ 60 • written 4.9 years ago by gjl ▴ 10

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1.5k

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dmrseq Methylation

updated 4.8 years ago by keegan ▴ 60 • written 4.8 years ago by sorjuelal • 0

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1.3k

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installation problem dmrseq bumphunter

updated 5.5 years ago by shepherl 3.8k • written 5.5 years ago by guy.bioinfo ▴ 10

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2.1k

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dmrseq

updated 5.5 years ago by keegan ▴ 60 • written 5.5 years ago by kuckunniwid • 0

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952

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dmrseq

updated 5.7 years ago by keegan ▴ 60 • written 5.7 years ago by swebb1 • 0

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1.2k

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dmrseq bsseq

updated 5.9 years ago by James W. MacDonald 65k • written 5.9 years ago by Bruno Verstraeten • 0

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1.4k

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dmrseq dmr dmrs bisulfite methylation

updated 6.2 years ago by keegan ▴ 60 • written 6.2 years ago by l.kremer • 0

13 results • Page 1 of 1

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Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10

Hi Michael, thanks for the answer! I'll have a look : )

Comment: DESeq filtering specific to contrasts by Michael Love 41k

It will likely not filter it out, but really the per-dataset details would affect the results.

Comment: DESeq filtering specific to contrasts by Carlin95 • 0

Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…

Comment: FilterByExpr low counts with small sample size by Jonathan ▴ 10

Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…

Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Seyram M. • 0

Thank you very much for your reply! I will do so. Kind regards, Seyram

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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

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