Bioconductor Dna

Showing : dna • reset

votes

replies

2.5k

views

biostrings mask repeatmasker DNA

updated 3.2 years ago by ivantsers • 0 • written 6.4 years ago by beausoleilmo • 0

votes

replies

1.8k

views

decipher DNA biostrings

updated 6.3 years ago by Erik Wright ▴ 150 • written 6.3 years ago by reubenmcgregor88 • 0

votes

1.3k

views

ABI sequence DNA melting curve

updated 8.9 years ago by Hervé Pagès 16k • written 8.9 years ago by Prasanth ▴ 20

vote

1.1k

views

software codon usage bias dna

updated 4.4 years ago by anamaria ▴ 10 • written 4.4 years ago by jol.espinoz ▴ 40

votes

743

views

TFBSTools DNASeqData readFASTA DNA RStudio

updated 2.5 years ago by James W. MacDonald 65k • written 2.5 years ago by HELEN • 0

votes

590

views

DNA alphabet

updated 5.1 years ago by James W. MacDonald 65k • written 5.1 years ago by fjia304 • 0

votes

replies

472

views

DNA repeats

14 months ago me-nobody • 0

7 results • Page 1 of 1

Recent ...

Replies

Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by russ.bainer ▴ 10

Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…

Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Chris • 0

Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …

Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10

Hi Michael, thanks for the answer! I'll have a look : )

Comment: DESeq filtering specific to contrasts by Michael Love 41k

It will likely not filter it out, but really the per-dataset details would affect the results.

Comment: DESeq filtering specific to contrasts by Carlin95 • 0

Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…

Votes

Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

Awards • All

Popular Question to James W. MacDonald 65k