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Comment: Unable to download supplementary files from GSE146963 using GEOquery
by
shepherl
3.2k
I'm not able to reproduce this. Are you sure you have permissions on where you are downloading/writing? ``` > getGEOSuppFiles("GSE146963"…
Answer: Unable to download supplementary files from GSE146963 using GEOquery
by
James W. MacDonald
60k
The error indicates that R doesn't have permissions to remove a file from that directory, which may imply that it doesn't have permissions …
Answer: data import error
by
Basti
▴ 400
You already imported `countData` with `read.csv()`, so it has no sense to make `read.csv` again on countData. Simply do `cts <- as.matrix(c…
Comment: DESeq2 Installation Errors
by
kerendanan1
• 0
Hey, I have the same probelm using mac. Did you manage to install it in an other way?
Comment: Differentially expressed genes from Deseq2 have similar counts
by
Basti
▴ 400
You will get your answer here : https://support.bioconductor.org/p/9145798/
Votes
Answer: Unable to download supplementary files from GSE146963 using GEOquery
Answer: Unable to download supplementary files from GSE146963 using GEOquery
Unable to download supplementary files from GSE146963 using GEOquery
edgeR: problem with the quasi-likelihood F-test
A: edgeR: problem with the quasi-likelihood F-test
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