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ebarrays
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EBarrays question
EBarrays
EBarrays
13.0 years ago
jgomez@uni-potsdam.de
▴ 30
0
votes
2
replies
791
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Question about Package EBarrays
EBarrays
EBarrays
updated 15.9 years ago by
Sean Davis
21k • written 15.9 years ago by
affy snp
▴ 640
0
votes
2
replies
1.4k
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LIMMA : design (1, 2, 3, 3 ) , I gotEXCITINGresults, what could be the logic, since i h
Microarray
GO
affy
limma
EBarrays
Microarray
GO
affy
limma
EBarrays
updated 19.0 years ago by
Marcus
▴ 150 • written 19.0 years ago by
Marcus Davy
▴ 680
0
votes
3
replies
1.4k
views
Recent changes to Bioconductor packages
Microarray
Ruuid
graph
limma
EBarrays
Microarray
Ruuid
graph
limma
EBarrays
20.1 years ago
madman@jimmy.harvard.edu
▴ 850
0
votes
3
replies
1.4k
views
utils required for EBarrays
EBarrays
EBarrays
updated 20.1 years ago by
Marcus Davy
▴ 680 • written 20.1 years ago by
Arne.Muller@aventis.com
▴ 620
0
votes
0
replies
1.0k
views
New packages in BioC
Microarray
EBarrays
Microarray
EBarrays
20.1 years ago
Jeff Gentry
★ 3.9k
6 results • Page
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Comment: Bioinformatics Laboratory Head in AI or machine learning (WEHI, Australia)
by
christianhilton64
• 0
I'm less familiar with the specifics of GSVA, but I'm curious about the overall goal of this analysis. Could you provide a high-level summa…
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
by
Robert Castelo
★ 3.2k
Hi, your `c2` object storing all the gene sets is probably a `list` object, where element names are the names of the pathways given by MSig…
Comment: Differential peaks that were not identified in diffbind were identified in diseq
by
lonn
• 0
I tried the default normalization and got similar results as above. Perhaps I need to try identifying the difference peak without using dif…
Answer: Cannabis and KEGGgraph
by
deeenes
▴ 30
Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…
Answer: RNAseq:Technical replicates from different batches
by
Gordon Smyth
50k
I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…
Votes
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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