Showing : ebseq • reset
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EBTest error please add gene/isoform names to the data matrix
EBSeq
3.9 years ago lli2 • 0
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3
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882
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Heatmap for ebseq2 output
ebseq
4.9 years ago drkousi31 • 0
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1.0k
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DE analysis when large portion of transcriptome is changed
rna-seq edger ebseq differential expression
updated 5.8 years ago by ★ 28k • written 5.8 years ago by • 0
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918
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[EBSEQ] Strange NA values
ebseq differential gene expression
7.8 years ago jean.keller ▴ 10
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917
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[EBSeq] Normalization and DE genes detection
ebseq normalization differential gene expression
7.9 years ago jean.keller ▴ 10
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1.2k
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EBSeq-HMM: retrieving expression paths for genes differing by time AND treatment
ebseq ebseq-hmm rna-seq
8.5 years ago vieuphoria ▴ 10
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903
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Matching New Samples to Differential Expression Profile
differential expression ebseq rnaseq
8.8 years ago jbarker2 • 0
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1.4k
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How to fully use the list of DEGs in non model species?
deseq2 gage ebseq rnaseq
8.8 years ago jackipchiho ▴ 10
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2
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1.3k
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EBSeq package gives NaN Values for EBMultiTest
differential expression ebseq rnaseq
9.0 years ago jbarker2 • 0
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2
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2.8k
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DE analysis with reference transcriptome
Sequencing GO Organism edgeR DESeq EBSeq Sequencing GO Organism edgeR DESeq EBSeq
updated 9.9 years ago by 65k • written 9.9 years ago by ▴ 10
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1.6k
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TCC::ERROR: Need the design matrix for GLM
DifferentialExpression Normalization Cancer edgeR baySeq DESeq EBSeq TCC Normalization
updated 10.0 years ago by ▴ 10 • written 10.0 years ago by 50k
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1.7k
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TCC::ERROR: Need the design matrix for GLM.
DifferentialExpression Normalization Cancer edgeR baySeq DESeq EBSeq TCC Normalization
updated 10.0 years ago by ▴ 10 • written 10.0 years ago by ▴ 100
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1.0k
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EBSeq Results Affected By Outlying Values
EBSeq EBSeq
10.3 years ago Dario Strbenac ★ 1.5k
13 results • Page 1 of 1
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Comment: Methylation Analysis experiment design using Limma by hortense96 • 0
Thank you very much for your reply and your suggestion, as I'm having a bit of trouble finding information on how to manage this part of th…
Comment: Limma design with continuous and categorical covariates by hortense96 • 0
Hello, I'm trying to do a differential methylation analysis with the Limma package and was wondering if you had any suggestions on how to …
Answer: minfi::read.metharray.exp by Basti ▴ 770
Could you show `list.files("~/Users/clarachretienneau/Desktop/clock epigenetic/PJ1209132_ScanData")` ? There may be a problem related to th…
Comment: DESeq2 - dispersion estimation when there is none by WardDeb • 0
Thank you for the pointers, I'll revert back again to the method section of the paper. As for the negative relationship of the estimated di…
Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by Gayatri • 0
Hello James, How to generate the db? By running the makeOrgPackageFromNCBI() command? I have tried doing that, first by just deleting the …
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Answer: OrgDb for maize
Answer: DESeq2 - dispersion estimation when there is none
Comment: Cannabis and KEGGgraph
Comment: Cannabis and KEGGgraph
Answer: Cannabis and KEGGgraph
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