Bioconductor Edge

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1.5k

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edge

updated 8.5 years ago by Aaron Lun ★ 28k • written 8.5 years ago by Arne Muller ▴ 20

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1.6k

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edge qpcr qvalue

7.1 years ago • updated 6.2 years ago joe.d.moore.ii • 0

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639

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microarray edge

4.9 years ago xgt1986627 ▴ 10

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595

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microarray edge

4.9 years ago xgt1986627 ▴ 10

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613

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edge RNA-seq

updated 4.9 years ago by James W. MacDonald 65k • written 4.9 years ago by xgt1986627 ▴ 10

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591

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edge

4.9 years ago xgt1986627 ▴ 10

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752

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edge microarray limma affy

4.8 years ago soumyab.g ▴ 10

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852

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edge DGE microarray

updated 4.4 years ago by Gordon Smyth 50k • written 4.4 years ago by joanasabinopinto • 0

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613

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edge Microarray longitudinal

2.1 years ago emily • 0

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1.1k

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edgeR edge

updated 16 months ago by Gordon Smyth 50k • written 16 months ago by Isa • 0

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1.3k

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edge timecourse fittimeseries

updated 8.4 years ago by Andrew Bass • 0 • written 8.5 years ago by warren.anderson • 0

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852

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edge differential gene expression timecourse interaction

5.7 years ago rubi ▴ 110

12 results • Page 1 of 1

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Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by Gayatri • 0

Hello James, How to generate the db? By running the makeOrgPackageFromNCBI() command? I have tried doing that, first by just deleting the …

Answer: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by Tim Peters ▴ 170

Hi Jose and Russ, Apologies to Jose for not seeing this earlier. Sometimes the loess smoother in the bottom panel will throw this error …

Comment: Trying to use enrichGO by fernanda.backsouza • 0

Sure, I changed it but still NULL G0 <- enrichGO( gene = ortologos_filtrados$Gene.ID, OrgDb = org.Cs.eg.db, keyType = "ENTREZID",…

Answer: limma-voom: Calculate the log-fold change in gene expression within a sample by Gordon Smyth 50k

No, you cannot use residuals to compute logFCs. From the information you give, I guess that you need to add individual-specific condition …

Comment: Error EPICv2 ChAMP by James W. MacDonald 65k

You don't need to do either of the above suggestions. ``` library(BiocManager) install("YuanTian1991/ChAMPdata") ``` will install without…

Votes

Comment: Cannabis and KEGGgraph

Answer: Cannabis and KEGGgraph

Answer: Differentially expressed genes in monocle pseudotime

Answer: DESeq2 - dispersion estimation when there is none

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Scholar to Gordon Smyth 50k