11.4 years ago
Jiantao Yu
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written 11.0 years ago by
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Koen Van den Berge
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written 11.2 years ago by
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written 9.9 years ago by
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10.2 years ago
Patrick Schorderet
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updated 10.5 years ago by
Gordon Smyth
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written 10.8 years ago by
Brian Haas
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updated 8.8 years ago by
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written 8.8 years ago by
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8.2 years ago
davide.bau
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updated 15 months ago by
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written 8.1 years ago by
myprogramming2016
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updated 10.3 years ago by
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written 10.3 years ago by
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KJ Lim
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updated 8.8 years ago by
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Mark Robinson
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Reanne Bowlby
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updated 14 months ago by
JG13
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written 11.8 years ago by
Makis Motakis
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Comment: GSEA preranked analysis downstream of DEseq2
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`logFC * -log10(pval)` seems to be the pi-score proposed in this [paper][1]
[1]: https://pmc.ncbi.nlm.nih.gov/articles/PMC3957066/
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Any update on this post? I also had an issue with this. [erosion control](https://charlestonhydroseeding.com/)
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One potential workaround might be to adjust for these factors using a combination of design matrices perhaps including batch as a covariate…
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