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Gordon Smyth
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written 8 days ago by
Netanel
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3
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3
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221
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3
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267
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updated 1 day ago by
Gordon Smyth
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written 6 days ago by
Simran
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4
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6
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324
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1
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3
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208
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updated 10 days ago by
James W. MacDonald
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written 10 days ago by
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2
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130
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12 days ago
Marianna
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4
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375
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3
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5
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319
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updated 16 days ago by
Gordon Smyth
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written 18 days ago by
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6
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297
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updated 17 days ago by
Gordon Smyth
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written 18 days ago by
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0
0
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195
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updated 25 days ago by
Gordon Smyth
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written 25 days ago by
scoops_streams_06
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5
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3
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658
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updated 19 days ago by
Gordon Smyth
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written 26 days ago by
Jack S.
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3
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257
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updated 28 days ago by
Gordon Smyth
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JKim
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2
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240
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updated 4 weeks ago by
Gordon Smyth
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written 4 weeks ago by
z_bahari
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2
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2
replies
231
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2
votes
2
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231
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0
votes
3
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348
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written 10 weeks ago by
pl23
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4
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349
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updated 5 weeks ago by
Gordon Smyth
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written 6 weeks ago by
Jack S.
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50
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1
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201
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updated 6 weeks ago by
Gordon Smyth
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written 6 weeks ago by
Fabian
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0
0
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11
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660
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updated 6 weeks ago by
Gordon Smyth
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written 7 weeks ago by
mico
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0
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1
reply
225
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updated 6 weeks ago by
Gordon Smyth
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written 6 weeks ago by
fr8712ca-s
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vote
6
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428
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2
votes
6
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371
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5
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4
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356
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325
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updated 10 weeks ago by
James W. MacDonald
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written 10 weeks ago by
Shaimaa Gamal
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4
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4
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410
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updated 11 weeks ago by
James W. MacDonald
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written 3 months ago by
Geo
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6
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7
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528
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updated 11 weeks ago by
Gordon Smyth
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written 11 weeks ago by
aa.machado001
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1
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8
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505
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updated 11 weeks ago by
Gordon Smyth
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written 11 weeks ago by
sat
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0
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0
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214
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2
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4
replies
514
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votes
3
replies
306
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updated 12 weeks ago by
Gordon Smyth
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written 12 weeks ago by
annasoudi
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3
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3
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617
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updated 12 weeks ago by
Gordon Smyth
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written 12 weeks ago by
Jurgen
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4
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9
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1.1k
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0
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1
reply
281
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updated 3 months ago by
Gordon Smyth
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written 3 months ago by
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5
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578
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3 months ago • updated 11 weeks ago
Lucy
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60
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2
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413
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3 months ago
Sabiha
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2
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495
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updated 4 months ago by
Gordon Smyth
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written 4 months ago by
annikagable
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2
replies
364
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updated 4 months ago by
Gordon Smyth
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written 4 months ago by
Jurgen
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7
votes
2
replies
690
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updated 4 months ago by
Gordon Smyth
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written 4 months ago by
annikagable
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0
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3
replies
426
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4
votes
2
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566
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updated 5 months ago by
Gordon Smyth
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written 5 months ago by
alvaroperona1
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6
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7
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892
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updated 5 months ago by
ATpoint
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written 6 months ago by
jonas.freimuth
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20
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255
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1
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3
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427
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0
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1
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422
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1
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6
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2.6k
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written 7.4 years ago by
Camila Orellana
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10
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4
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692
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updated 6 months ago by
Gordon Smyth
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written 6 months ago by
jbono
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10
3
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3
replies
554
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updated 6 months ago by
James W. MacDonald
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written 6 months ago by
stuartthafass
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Recent ...
Replies
Comment: Memory errors using read.bismark?
by
Juan Higareda
•
0
Thanks for the answer. Actually, processing one file and keeping it in memory wasn't the problem, is more processing all the 15 files to bu…
Answer: Differentially expressed genes in monocle pseudotime
by
Gordon Smyth
50k
You might try the methods in this paper:
Cheng J, Smyth GK*, Chen Y* (2023). Unraveling the timeline of gene expression: A pseudotempora…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Seyram M.
•
0
Thank you Michael for your attention to my question. I am truly grateful.
I subsetted the data using lines of codes to include only the g…
Comment: [DiffBind] Obtaining normalization factors
by
Henry
▴
10
I see, thank you for your suggestion! I managed to use a separate RLE normalization to obtain the size factors.
Answer: Memory errors using read.bismark?
by
Peter Hickey
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Thanks for sharing an example file.
This is a very large non-CpG methylation dataset, which are tricky to work with for a number of reason…
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