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Comment: What should be the normalization protocol for RNA seq data for WGCNA?
by
sukeshinik5
▴ 20
Thank you so much for your response. Can you please tell me what type of preprocessing should be expected for any gene correlation analysis…
Comment: Need help interpreting heatmaps from limma
by
odisgriffin205
• 0
In your case, you have three groups: ZnD, ZnR, and ZnE. The ZnR group serves as the control, while ZnD and ZnE are being compared against i…
Answer: What should be the normalization protocol for RNA seq data for WGCNA?
by
ATpoint
★ 4.5k
WGCNA is still not part of Bioconductor (https://support.bioconductor.org/p/9159948/#9159959) so please check its documentation what the au…
Comment: How to subset voomLmFit (MArrayLM) object?
by
Guido Hooiveld
★ 4.1k
Thanks to the both of you for your clarifications and suggestions!
Answer: featureCounts fails to load annotation file
by
Yang Liao
▴ 440
Hi Yasmin, I'm following up on the issue you're having with featureCounts and the GRCh38 RefSeq annotation. I've been testing featureCounts…
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Answer: Biostrings: Error writing long reads (>200kbps) with writeQualityScaledXStringSe
What should be the normalization protocol for RNA seq data for WGCNA?
What should be the normalization protocol for RNA seq data for WGCNA?
Answer: How to subset voomLmFit (MArrayLM) object?
Answer: How to subset voomLmFit (MArrayLM) object?
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