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enmix
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18
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2.4k
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problem installing ENmix package
ENmix
Bioconductor
rtracklayer
written 3.1 years ago by
lea
• 0
0
votes
0
replies
653
views
Help with ENmix readidat
ENmix
IlluminaHumanMethylationEPICmanifest
updated 23 months ago by
shepherl
3.8k • written 23 months ago by
Daphna
• 0
0
votes
0
replies
683
views
can ENmix::oxBS.MLE be run on comBat-adjusted data?
ENmix
comBat
3.1 years ago
joannew
• 0
0
votes
0
replies
552
views
ENmix: how to combine oxBS.MLE with RCP?
ENmix
3.2 years ago
joannew
• 0
0
votes
1
reply
836
views
could not find function "ComBat.mc"
ENmix
updated 3.4 years ago by
shepherl
3.8k • written 3.4 years ago by
ycding
▴ 10
1
vote
0
replies
589
views
Error in peak calling with Combp
ENmix
3.5 years ago
mwjnorris
▴ 10
0
votes
0
replies
640
views
Error for ENmix::bmiq.mc() on one sample
ENmix
5.1 years ago
moldach
▴ 20
0
votes
0
replies
1.1k
views
Error in ENmix::bmiq.mc(): BMIQ estimates encountered error, try to run it again
methylation
ENmix
BMIQ
wateRmelon
5.2 years ago
moldach
▴ 20
1
vote
2
replies
972
views
how to install ENmix github master branch on Ubuntu machine?
ENmix
written 7.7 years ago by
avilella
▴ 10
0
votes
4
replies
1.8k
views
ComBat: Adjustment for 3experimental variables
ENmix
combat.mc
illumina450k
combat sva
7.8 years ago
DSP
• 0
10 results • Page
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Comment: Different Shrunk Log2FC according with reference
by
andrebolerbarros
▴ 20
Thanks @atpoint for your answer! The issue with that is then it severely hinders the possiblity of using `apeglm` shrinking approach, sinc…
Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge
by
ATpoint
★ 4.0k
The error that is relevant is `Aborted (core dumped)`. This line 2890 refers to the C source code that throws the error, it is not relevant…
Answer: Different Shrunk Log2FC according with reference
by
ATpoint
★ 4.0k
Please see: https://support.bioconductor.org/p/p134551/ I asked basically the same before. In short, reference level might have an influ…
Comment: Error for AnnotationForge makeOrgPackageFromNCBI function
by
Gayatri
• 0
What I meant is even after deleting the NCBI.sqlite file, and re-running the script, an empty NCBI.sqlite file (0 kb) is created which is c…
Comment: DESeq2 output used for PCA plot on R studio
by
ATpoint
★ 4.0k
> Increase variability for mutants: use larger subtractive modifiers I was thinking the same as swbarnes. You're doing some data munging h…
Votes
Comment: get BM error
Answer: Citation for edgeR user guide
Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)
Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.
Answer: minfi::read.metharray.exp
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ATpoint
★ 4.0k
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Gordon Smyth
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i.sudbery
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Michael Love
41k
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shepherl
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