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enrichGO
•
reset
4
votes
2
replies
6.6k
views
How to export enrichGO results for future visualization with barplot, dotplot, emapplot...
clusterprofiler
enrichGO
barplot
dotplot
5.7 years ago
MAP
• 0
2
votes
2
replies
1.1k
views
Using clusterProfiler for depletion analysis
clusterProfiler
enrichGO
2.4 years ago
samsiljee
• 0
2
votes
2
replies
1.8k
views
Mapping nothing when doing Enrichment Analysis of the TAIR using enrichGO in R
enrichGO
2.9 years ago
dailing57
• 0
2
votes
10
replies
12k
views
keytype not supported in clusterprofiler when it is ensembl IDs?
clusterProfiler
enrichGO
updated 4.0 years ago by
James W. MacDonald
65k • written 4.0 years ago by
kavator
▴ 30
2
votes
8
replies
1.6k
views
gene enrichment using enrichGO function throuth annotationHub orgDb
software error
enrichGO
annotationHub
clusterProfiler
Job
updated 4.0 years ago by
James W. MacDonald
65k • written 4.0 years ago by
bnajafpour
• 0
2
votes
5
replies
3.1k
views
How to use EnrichGo of Cluster Profiler
EnrichGO
clusterProfiler
written 3.3 years ago by
Carolina
• 0
2
votes
15
replies
644
views
Problems with enrichGO
clusterProfiler
enrichGO
updated 10 weeks ago by
Michael Love
41k • written 10 weeks ago by
cinzia.spagnoli
• 0
1
vote
1
reply
1.2k
views
clusterProfiler enrichGO under-represented term
clusterProfiler
enrichGO
6.6 years ago
Francois Marchildon
▴ 20
1
vote
1
reply
1.6k
views
enrichGO results
clusterProfiler
enrichGO
21 months ago
Shakiba
• 0
0
votes
1
reply
9.2k
views
"No genes can be mapped...." using enrichGO in clusterProfiler
R
TAIR
clusterProfiler
enrichGO
Arabidopsis
updated 3.0 years ago by
Guido Hooiveld
★ 3.9k • written 3.0 years ago by
abby-s
• 0
0
votes
2
replies
921
views
ClusterProfiler: enrichResult table with genes that do not have GO-term
ClusterProfiler
enrichGO
updated 4.2 years ago by
James W. MacDonald
65k • written 4.2 years ago by
Reb
• 0
0
votes
0
replies
793
views
Simplify - clusterProfiler
RNASeq
simplify
clusterProfiler
enrichGO
simplifyEnrichment
19 months ago
estafana.t98
• 0
0
votes
2
replies
1.7k
views
How to select a specific onthology after runing enrichGO for all 3 onthology
enrichGO
clusterprofiler
5.7 years ago
MAP
• 0
0
votes
2
replies
1.5k
views
Too many genes in GO term after enrichGO
clusterProfiler
enrichGO
clusterPro
2.4 years ago
slimyMS
• 0
14 results • Page
1 of 1
Recent ...
Replies
Answer: Citation for edgeR user guide
by
Gordon Smyth
50k
Thanks for thinking about how to cite edgeR. Citations are indeed the main way by which the edgeR authors get credit for their work. The Us…
Comment: DESeq2 output used for PCA plot on R studio
by
swbarnes2
★ 1.3k
You are just making up data? What is the point of this exercise?
Comment: How to retrieve gene ontology GO class?
by
James W. MacDonald
65k
What do you mean by 'the information'? Do you have things in particular that you want?
Comment: minfi::read.metharray.exp
by
clacarion
• 0
I think its work with `read.metharray.sheet` ```r > sheet <- read.metharray.sheet("/Users/clarachretienneau/Desktop/clock_epigenetic/PJ120…
Comment: minfi::read.metharray.exp
by
clacarion
• 0
Thank you for your response Basti ! I add all the idat files in a unique folder called "idat" and add it in my path ```r > list.files("…
Votes
Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)
Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.
Answer: minfi::read.metharray.exp
Comment: Trying to use enrichGO
Answer: Cannabis OrgDb
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