Bioconductor Enrichplot

Showing : enrichplot • reset

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125

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DOSE enrichplot clusterProfiler

updated 8 days ago by Guido Hooiveld ★ 3.9k • written 12 days ago by Lucie • 0

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237

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enrichplot barplot clusterProfiler

5 weeks ago Eva ▴ 10

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950

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enrichplot

12 weeks ago • updated 9 weeks ago Tobias • 0

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231

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enrichplot

updated 3 months ago by James W. MacDonald 65k • written 3 months ago by Grace.Ciabattoni • 0

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584

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topGO enrichplot

updated 6 months ago by James W. MacDonald 65k • written 6 months ago by nromerov • 0

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342

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enrichplot stringr heatplot

7 months ago ruba-mahmoud • 0

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1.3k

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enrichplot GSEA clusterProfiler

updated 6 months ago by Fatemeh • 0 • written 8 months ago by Cen • 0

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996

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enrichplot clusterProfiler

updated 9 months ago by Lluís Revilla Sancho ▴ 730 • written 10 months ago by Manuela • 0

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1.4k

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enrichplot clusterProfiler

11 months ago Tyroone • 0

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1.9k

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heatplot enrichplot

updated 7 months ago by ruba-mahmoud • 0 • written 16 months ago by Melanie • 0

10 results • Page 1 of 1

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Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by Gayatri • 0

Hello James, How to generate the db? By running the makeOrgPackageFromNCBI() command? I have tried doing that, first by just deleting the …

Answer: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by Tim Peters ▴ 170

Hi Jose and Russ, Apologies to Jose for not seeing this earlier. Sometimes the loess smoother in the bottom panel will throw this error …

Comment: Trying to use enrichGO by fernanda.backsouza • 0

Sure, I changed it but still NULL G0 <- enrichGO( gene = ortologos_filtrados$Gene.ID, OrgDb = org.Cs.eg.db, keyType = "ENTREZID",…

Answer: limma-voom: Calculate the log-fold change in gene expression within a sample by Gordon Smyth 50k

No, you cannot use residuals to compute logFCs. From the information you give, I guess that you need to add individual-specific condition …

Comment: Error EPICv2 ChAMP by James W. MacDonald 65k

You don't need to do either of the above suggestions. ``` library(BiocManager) install("YuanTian1991/ChAMPdata") ``` will install without…

Votes

Comment: Cannabis and KEGGgraph

Answer: Cannabis and KEGGgraph

Answer: Differentially expressed genes in monocle pseudotime

Answer: DESeq2 - dispersion estimation when there is none

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Scholar to Gordon Smyth 50k