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enrichplot
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Looking for documentation about the use of "split = .sign" in enrichplot's dotplot
enrichplot
8 weeks ago • updated 5 weeks ago
Tobias
• 0
0
votes
5
replies
931
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plot enrichment results
enrichplot
clusterProfiler
updated 8 months ago by
Lluís Revilla Sancho
▴ 730 • written 9 months ago by
Manuela
• 0
0
votes
5
replies
1.8k
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How can I limit the number of displayed genes in heatplot
heatplot
enrichplot
updated 7 months ago by
ruba-mahmoud
• 0 • written 15 months ago by
Melanie
• 0
2
votes
4
replies
1.3k
views
Change dotsize to be the same in multiple plots - enrichplot dotplot
enrichplot
clusterProfiler
10 months ago
Tyroone
• 0
0
votes
3
replies
1.2k
views
gseaplot2 from enrichplot for gene set enrichment analysis comparing two datasets
enrichplot
GSEA
clusterProfiler
updated 5 months ago by
Fatemeh
• 0 • written 7 months ago by
Cen
• 0
2
votes
2
replies
186
views
padj-based gradient scale from barplot (clusterProfiler results) does not work properly
enrichplot
barplot
clusterProfiler
10 days ago
Eva
▴ 10
0
votes
2
replies
533
views
enrichPlot error when plotting topGO results
topGO
enrichplot
updated 5 months ago by
James W. MacDonald
65k • written 5 months ago by
nromerov
• 0
0
votes
1
reply
189
views
visualizing GSEA showCategory question
enrichplot
updated 9 weeks ago by
James W. MacDonald
65k • written 9 weeks ago by
Grace.Ciabattoni
• 0
0
votes
0
replies
310
views
HeatPlot - Genes selections
enrichplot
stringr
heatplot
6 months ago
ruba-mahmoud
• 0
9 results • Page
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Answer: New genes that did not exist in dds object suddenly showed up after degPatterns
by
Michael Love
41k
May be documented by the software you are using? https://github.com/lpantano/DEGreport
Answer: Doing comparison of RNA-seq data using Deseq2
by
Michael Love
41k
Take a look at our workflow, this starts from a beginner's level. You could export from Excel using CSV or TSV, then read into R. htt…
Answer: WGCNA: analysis of complex trait associations with regressions
by
James W. MacDonald
65k
This support site is meant to help people with questions about Bioconductor packages (WGCNA is not a Bioconductor package). You might try o…
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Votes
transcript name mapping between human and mouse
transcript name mapping between human and mouse
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
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