Showing : enrichplot • reset
5
votes
3
replies
955
views
Using the plotting functions of clusterProfiler / enrichplot with enrichment results from other programs
clusterProfiler enrichplot
2.4 years ago • updated 4 months ago charles.foster ▴ 110
2
votes
1
reply
168
views
Parsing geoms to enrichplot
enrichplot
13 months ago Francois Marchildon ▴ 20
2
votes
6
replies
1.1k
views
color scale in cnetplot (enrichplot) is not centered in 0, skewed towards positive values
enrichplot clusterProfiler
9 months ago • updated 8 months ago Emilia ▴ 30
2
votes
4
replies
453
views
Visualization of Functional Enrichment Result with enrichplot: How to control label size?
clusterProfiler enrichplot cnetplot
updated 20 months ago by 58k • written 20 months ago by ▴ 30
1
vote
3
replies
165
views
Issues with scaling down enrichplot's dotplot and gseaplot2 plots
RNASeq clusterProfiler enrichplot
8 weeks ago jiro.becker • 0
0
votes
0
replies
56
views
EnrichGO
R enrichplot
updated 5 weeks ago by 3.4k • written 5 weeks ago by • 0
0
votes
0
replies
230
views
similarity coefficients used in emapplot {enrichplot} / gsePathway {ReactomePA} and simplify {clusterProfiler}
enrichplot ReactomePA clusterProfiler similarity coefficients emapplot
16 months ago jan.soderman • 0
0
votes
0
replies
448
views
enrichplot packages - is there a way of dropping specific KEGG classes
enrichplot clusterProfiler enrichKEGG gseKEGG
2.6 years ago yurigorelik ▴ 10
0
votes
1
reply
423
views
emapplot (enrichplot) with compareCluster object does not work
emapplot enrichplot clusterProfiler compareCluster
updated 19 months ago by ★ 3.0k • written 19 months ago by • 0
0
votes
0
replies
599
views
Moving around nodes using emapplot {enrichplot} or enrichMap {DOSE}
enrichment map emapplot enrichplot enrichMap DOSE
3.3 years ago jan.soderman • 0
0
votes
1
reply
287
views
Cut down genes displayed on x axis from enrichPlot's heatplot() function
clusterProfiler GeneSetEnrichment enrichplot
updated 8 months ago by ▴ 30 • written 9 months ago by • 0
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I see you are trying to fill the missing transform info to `gs_bcell_auto` , which is a hack, but since you seems to know what you are doin…
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Can you grant the public caccess to you fcs to reproduce your issue?
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You didn't post your example code, so here is my best guess of your workflow > library(flowCore) > library(flowWorkspace) …
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