Showing : ensembl • reset
2
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3
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193
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biomaRt server error, and mirrors do not help
ensembl biomaRt R
18 days ago • updated 10 days ago kieran.short ▴ 10
2
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0
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78
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News: News:Ensembl 106 has just been released!
ensembl biomaRt ensembldb
5 weeks ago Benjamin ▴ 20
2
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3
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202
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Ensembl non responsive
ensembl R
5 weeks ago ksci ▴ 10
2
votes
1
reply
125
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Can Rsubread output use Ensembl gene IDs
Ensembl Rsubread
updated 7 weeks ago by 45k • written 7 weeks ago by ▴ 10
8
votes
9
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724
views
Where can I find EnsDb.Hsapiens.v105?
Ensembl Rstudio ensembldb AnnotationHub ensdb
updated 3 months ago by 15k • written 3 months ago by ▴ 30
0
votes
3
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246
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biomaRT getBM() get stuck
biomaRt getbm ensembl
updated 4 months ago by ★ 5.5k • written 4 months ago by • 0
1
vote
0
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146
views
News: Ensembl 105 has just been released!
ensembl biomaRt ensembldb
5 months ago mchakiachvili ▴ 20
15
votes
13
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763
views
celldex ensembl gene annotation issue
SingleR celldex HumanPrimaryCellAtlasData ensembl
updated 6 months ago by ▴ 10 • written 6 months ago by ▴ 20
0
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6
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454
views
Getting paralogus genes from biomart for mouse
biomart biomaRt Ensembl
updated 9 months ago by 3.5k • written 9 months ago by • 0
5
votes
12
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1.3k
views
Ensembl plants at annotationHub?
ensembl ensembldb plant arabidopsis thaliana annotationhub
updated 3 days ago by ★ 1.9k • written 3.5 years ago by ★ 3.2k
10 results • Page 1 of 1
Recent ...
Replies
Answer: ashr vs apeglm for interaction data by Michael Love 36k
Can you show the MA plot for these two analyses? Also for a gene with a large LFC from ashr, can you show plotCounts?
Comment: Robust Multi-array Average could get negative value or not? by Yang Shi • 0
Got the point sir~ Thanks so much!
Comment: Robust Multi-array Average could get negative value or not? by James W. MacDonald 59k
Because it's a small number.
Comment: Robust Multi-array Average could get negative value or not? by Yang Shi • 0
Thanks for your quick reply sir! Could you tell me why 4 which you selected here?
Answer: Robust Multi-array Average could get negative value or not? by James W. MacDonald 59k
After running RMA, your data have been logged, base 2. Any value < 1 will have a negative value. Looking at the data from that GEO submissi…
Votes
Answer: Robust Multi-array Average could get negative value or not?
Answer: Robust Multi-array Average could get negative value or not?
Answer: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
Answer: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
Answer: Print EnhancedVolcano Plot as jpeg or similar in R Notebook
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