Bioconductor Error

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1.5k

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error RStudio ggplot2 DESeq2

updated 5 months ago by James W. MacDonald 65k • written 5 months ago by BioES • 0

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6.3k

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error lazy R biomaRt table

updated 26 days ago by juo5 • 0 • written 5 months ago by Abhishek ▴ 10

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269

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proActiv error estimateSizeFactorsForMatrix

5 months ago Chris • 0

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366

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TCGAbiolinks error GDC_prepare

5 months ago leon • 0

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594

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Config DiffBind Error

updated 8 months ago by Rory Stark ★ 5.1k • written 8 months ago by jason.kost • 0

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deseq2 differential expression error

updated 10 months ago by snow34 • 0 • written 6.6 years ago by ap3637 • 0

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449

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customProDB easyrun error mm10 Mus_musculus_Data

updated 11 months ago by James W. MacDonald 65k • written 11 months ago by Esraa • 0

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error SingleCell annotate

updated 4 months ago by yw24418 • 0 • written 13 months ago by sandra.garces.19 • 0

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Comment: geneList error in clusterprofiler by Ana • 0

Ahh thank you, that fixed it!

Answer: geneList error in clusterprofiler by Basti ▴ 750

Have a look at the documentation : https://www.rdocumentation.org/packages/clusterProfiler/versions/3.0.4/topics/gseGO geneList argument s…

Comment: Memory errors using read.bismark? by Juan Higareda • 0

Thanks again for your answer, I will try to play a little bit with the parameters. Only one thing, my data are actually CpG methylation :)…

Comment: flowStats Search Error by tholmes • 0

Thank you so much!

Comment: what is the sampleFiles by James W. MacDonald 65k

I don't see any sampleFiles argument for any function in that package. Ideally you would at least tell us what function you are using.

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Comment: Memory errors using read.bismark?

Comment: Not fully paired differential gene expression analysis

Comment: [DiffBind] Obtaining normalization factors

Answer: ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with var

Comment: Not fully paired differential gene expression analysis

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