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News: BioCAsia2023 Abstract Submission & Registration Now Open!
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7 months ago
Maria Doyle
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Maria Doyle
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Win 1 of 50 free virtual registrations to BioC Asia 2022 (Dec 1-2, 2022)
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Peter Hickey
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European Bioconductor Conference 2023 planning
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william
• 0 • written 18 months ago by
Maria Doyle
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18 months ago • updated 17 months ago
Peter Hickey
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Public Calendar of Events
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3.9 years ago
shepherl
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EMBO | EMBL Symposium: The Molecular Basis and Evolution of Sexual Dimorphism
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EMBL Events
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4.6 years ago
Steve Pederson
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Comment: DESeq filtering specific to contrasts
by
Michael Love
41k
It will likely not filter it out, but really the per-dataset details would affect the results.
Comment: DESeq filtering specific to contrasts
by
Carlin95
• 0
Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…
Comment: FilterByExpr low counts with small sample size
by
Jonathan
▴ 10
Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Seyram M.
• 0
Thank you very much for your reply! I will do so. Kind regards, Seyram
Comment: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
by
isaac.vock
• 0
Thank you for your response. I can confirm that setting `-t exon` and/or removing `-s 1` and adding `-O` has no impact on the number of suc…
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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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